F8KRN5 (F8KRN5_HELBC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase EMBL CCB79422.1
EC=4.1.1.15 EMBL CCB79422.1

Gene names

Ordered Locus Names:

HBZC1_04360 EMBL CCB79422.1

Organism

Helicobacter bizzozeronii (strain CIII-1) [Complete proteome] [HAMAP]

Taxonomic identifier

1002804 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter › Helicobacter bizzozeronii

Protein attributes

Sequence length	263 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL CCB79422.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F8KRN5 [UniParc]. Last modified September 21, 2011. Version 1. Checksum: CB6EAE31410FA734	FASTA	263	30,213
	10 20 30 40 50 60 MGITYTGAFD DIVTLDKLLS EYNRQAKISV FIHVDAASGG LYLPFMEPNL AWDFRLKNVV 70 80 90 100 110 120 SISTSGHKYG LIYPGIGWVM WRDKQFLPDE LIFKVAYLGD FEPTFQINFS RSGSQIWAQY 130 140 150 160 170 180 YCFVRWGFEG YRAVHAKTRD VGLFLARGIK ALGLFEMINE GENIPIICWA MNAQAQQEKQ 190 200 210 220 230 240 WDLYDLADRL RFNGWQVPAY PLPANFQNVS VMRIVVRADQ SMEQMSLFLK DLKQAIKELD 250 260 TAKLGKHKRL SEENGVVPMG YTH

References

[1]	"Genome sequence of Helicobacter bizzozeronii strain CIII-1, an isolate from human gastric mucosa." Schott T., Rossi M., Hanninen M.L. J. Bacteriol. 193:4565-4566(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CIII-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FR871757 Genomic DNA. Translation: CCB79422.1.
RefSeq	YP_004607134.1. NC_015674.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CCB79422; CCB79422; HBZC1_04360.
GeneID	10819572.
KEGG	hbi:HBZC1_04360.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01580.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
ProtoNet	Search...

Entry information

Entry name

F8KRN5_HELBC

Accession

Primary (citable) accession number: F8KRN5

Entry history

Integrated into UniProtKB/TrEMBL:	September 21, 2011
Last sequence update:	September 21, 2011
Last modified:	April 3, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)