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F8KRN5 (F8KRN5_HELBC) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL CCB79422.1
Gene names
Ordered Locus Names:HBZC1_04360 EMBL CCB79422.1
OrganismHelicobacter bizzozeronii (strain CIII-1) [Complete proteome] [HAMAP]
Taxonomic identifier1002804 [NCBI]
Taxonomic lineageBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter

Protein attributes

Sequence length263 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
F8KRN5 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: CB6EAE31410FA734

FASTA26330,213
        10         20         30         40         50         60 
MGITYTGAFD DIVTLDKLLS EYNRQAKISV FIHVDAASGG LYLPFMEPNL AWDFRLKNVV 

        70         80         90        100        110        120 
SISTSGHKYG LIYPGIGWVM WRDKQFLPDE LIFKVAYLGD FEPTFQINFS RSGSQIWAQY 

       130        140        150        160        170        180 
YCFVRWGFEG YRAVHAKTRD VGLFLARGIK ALGLFEMINE GENIPIICWA MNAQAQQEKQ 

       190        200        210        220        230        240 
WDLYDLADRL RFNGWQVPAY PLPANFQNVS VMRIVVRADQ SMEQMSLFLK DLKQAIKELD 

       250        260 
TAKLGKHKRL SEENGVVPMG YTH 

« Hide

References

[1]"Genome sequence of Helicobacter bizzozeronii strain CIII-1, an isolate from human gastric mucosa."
Schott T., Rossi M., Hanninen M.L.
J. Bacteriol. 193:4565-4566(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CIII-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FR871757 Genomic DNA. Translation: CCB79422.1.
RefSeqYP_004607134.1. NC_015674.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCB79422; CCB79422; HBZC1_04360.
GeneID10819572.
KEGGhbi:HBZC1_04360.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF8KRN5_HELBC
AccessionPrimary (citable) accession number: F8KRN5
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: October 16, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)