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Protein
Submitted name:

Glutamate decarboxylase

Gene

HBZC1_04360

Organism
Helicobacter bizzozeronii (strain CIII-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Glutamate decarboxylaseImported (EC:4.1.1.15Imported)
Gene namesi
Ordered Locus Names:HBZC1_04360Imported
OrganismiHelicobacter bizzozeronii (strain CIII-1)Imported
Taxonomic identifieri1002804 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
ProteomesiUP000008387 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi1002804.HBZC1_04360.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.
OMAiCRCGFEM.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

F8KRN5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGITYTGAFD DIVTLDKLLS EYNRQAKISV FIHVDAASGG LYLPFMEPNL
60 70 80 90 100
AWDFRLKNVV SISTSGHKYG LIYPGIGWVM WRDKQFLPDE LIFKVAYLGD
110 120 130 140 150
FEPTFQINFS RSGSQIWAQY YCFVRWGFEG YRAVHAKTRD VGLFLARGIK
160 170 180 190 200
ALGLFEMINE GENIPIICWA MNAQAQQEKQ WDLYDLADRL RFNGWQVPAY
210 220 230 240 250
PLPANFQNVS VMRIVVRADQ SMEQMSLFLK DLKQAIKELD TAKLGKHKRL
260
SEENGVVPMG YTH
Length:263
Mass (Da):30,213
Last modified:September 21, 2011 - v1
Checksum:iCB6EAE31410FA734
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR871757 Genomic DNA. Translation: CCB79422.1.

Genome annotation databases

EnsemblBacteriaiCCB79422; CCB79422; HBZC1_04360.
KEGGihbi:HBZC1_04360.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR871757 Genomic DNA. Translation: CCB79422.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi1002804.HBZC1_04360.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCB79422; CCB79422; HBZC1_04360.
KEGGihbi:HBZC1_04360.

Phylogenomic databases

KOiK01580.
OMAiCRCGFEM.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of Helicobacter bizzozeronii strain CIII-1, an isolate from human gastric mucosa."
    Schott T., Rossi M., Hanninen M.L.
    J. Bacteriol. 193:4565-4566(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CIII-1Imported.

Entry informationi

Entry nameiF8KRN5_HELBC
AccessioniPrimary (citable) accession number: F8KRN5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: July 22, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.