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F8KRD3 (F8KRD3_HELBC) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length460 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Binds 1 magnesium ion per subunit By similarity. SAAS SAAS016066

Sequence similarities

Belongs to the phosphohexose mutase family. RuleBase RU004326

Sequences

Sequence LengthMass (Da)Tools
F8KRD3 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: BA9165F2D7C4FB97

FASTA46051,214
        10         20         30         40         50         60 
MQLDPSIFRE YDIRGIFGQH LTQEVVYNIG VYLGRLMALS GSSVAVGYDA RTHSAALFEW 

        70         80         90        100        110        120 
LKNGLQNSLK VYDLGLIPTP VAYFTTFNKI EGISTSHSIM ITGSHNPPDY NGFKITLDQQ 

       130        140        150        160        170        180 
PFYGAQIQAL KEQIAKQPLA YAPSPTTPKK LNALRAYHEY LIQAFKHLQN FPYKIALDFG 

       190        200        210        220        230        240 
NGVGALGLEP VLKALNANFD SLYANPDGTF PNHHPDPSES KNLADLKAHM QAQGIEIGLA 

       250        260        270        280        290        300 
FDGDADRIAL LTPKRTYGGD ELAIVLAEQM LKQGIKPLVI GEVKCSQVMY DTINSFGQAL 

       310        320        330        340        350        360 
MYKTGHSNLK VKLKETKAHL AAEMSGHLFF NDRYFGYDDA LYAALRLLEL LKQQSPQELE 

       370        380        390        400        410        420 
ARMGALPYSY KTAEEKISVP EEQKFQIIEK LKKSLQAPLP PNFPPIIEVI GIDGVRVIFE 

       430        440        450        460 
HGFGLVRASN TTPMLVTRFE GKDQACAERY KKTLLDLLEL

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References

[1]"Genome sequence of Helicobacter bizzozeronii strain CIII-1, an isolate from human gastric mucosa."
Schott T., Rossi M., Hanninen M.L.
J. Bacteriol. 193:4565-4566(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CIII-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		FR871757 Genomic DNA. Translation: CCB79309.1.
RefSeqYP_004607021.1. NC_015674.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCB79309; CCB79309; HBZC1_03230.
GeneID10819459.
KEGGhbi:HBZC1_03230.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK15778.

Family and domain databases

Gene3D3.40.120.10. 3 hits.
InterProIPR005844. A-D-PHexomutase_a/b/a-I.
IPR016055. A-D-PHexomutase_a/b/a-I/II/III.
IPR005845. A-D-PHexomutase_a/b/a-II.
IPR005846. A-D-PHexomutase_a/b/a-III.
IPR005843. A-D-PHexomutase_C.
IPR016066. A-D-PHexomutase_CS.
IPR005841. Alpha-D-phosphohexomutase_SF.
[Graphical view]
PfamPF02878. PGM_PMM_I. 1 hit.
PF02879. PGM_PMM_II. 1 hit.
PF02880. PGM_PMM_III. 1 hit.
PF00408. PGM_PMM_IV. 1 hit.
[Graphical view]
PRINTSPR00509. PGMPMM.
SUPFAMSSF53738. A-D-PHexomutase_a/b/a-I/II/III. 3 hits.
PROSITEPS00710. PGM_PMM. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF8KRD3_HELBC
AccessionPrimary (citable) accession number: F8KRD3
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: April 3, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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