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Protein

Succinate dehydrogenase iron-sulfur subunit

Gene

HBZC1_01920

Organism
Helicobacter bizzozeronii (strain CIII-1)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Succinate + a quinone = fumarate + a quinol.UniRule annotation

Cofactori

Protein has several cofactor binding sites:
  • [2Fe-2S] clusterUniRule annotationNote: Binds 1 [2Fe-2S] cluster.UniRule annotation
  • [3Fe-4S] clusterUniRule annotationNote: Binds 1 [3Fe-4S] cluster.UniRule annotation
  • [4Fe-4S] clusterUniRule annotationNote: Binds 1 [4Fe-4S] cluster.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionOxidoreductaseImported
Ligand2Fe-2SUniRule annotation, 3Fe-4SUniRule annotation, 4Fe-4SUniRule annotation, Iron, Iron-sulfur, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Succinate dehydrogenase iron-sulfur subunitUniRule annotation (EC:1.3.5.1UniRule annotation)
Gene namesi
Ordered Locus Names:HBZC1_01920Imported
OrganismiHelicobacter bizzozeronii (strain CIII-1)Imported
Taxonomic identifieri1002804 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
Proteomesi
  • UP000008387 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi1002804.HBZC1_01920.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 952Fe-2S ferredoxin-typeInterPro annotationAdd BLAST88
Domaini142 – 1714Fe-4S ferredoxin-typeInterPro annotationAdd BLAST30

Sequence similaritiesi

Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105E33. Bacteria.
COG0479. LUCA.
KOiK00245.
OMAiESWIHTN.
OrthoDBiPOG091H02OF.

Family and domain databases

CDDicd00207. fer2. 1 hit.
Gene3Di1.10.1060.10. 1 hit.
3.10.20.30. 1 hit.
InterProiView protein in InterPro
IPR036010. 2Fe-2S_ferredoxin-like_sf.
IPR001041. 2Fe-2S_ferredoxin-type.
IPR006058. 2Fe2S_fd_BS.
IPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
IPR012675. Beta-grasp_dom_sf.
IPR009051. Helical_ferredxn.
IPR004489. Succ_DH/fum_Rdtase_Fe-S.
IPR025192. Succ_DH/fum_Rdtase_N.
PfamiView protein in Pfam
PF13085. Fer2_3. 1 hit.
PF13183. Fer4_8. 1 hit.
SUPFAMiSSF46548. SSF46548. 1 hit.
SSF54292. SSF54292. 1 hit.
TIGRFAMsiTIGR00384. dhsB. 1 hit.
PROSITEiView protein in PROSITE
PS00197. 2FE2S_FER_1. 1 hit.
PS51085. 2FE2S_FER_2. 1 hit.
PS00198. 4FE4S_FER_1. 1 hit.
PS51379. 4FE4S_FER_2. 1 hit.

Sequencei

Sequence statusi: Complete.

F8KR11-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRTITIKAL KFDPQSAVSK PHFKEYQLQE IPSMTLFIAL GIIRETLDPD
60 70 80 90 100
LSFDFVCRAG ICGSCAMMVN GRPRLACKTL TSSFQEDTIT LMPMPSFPLI
110 120 130 140 150
KDLSVNTGEW FFNMTKRVES WAHHRKEVDI TQPEERIDPD EAQEVFELDR
160 170 180 190 200
CIECGCCIAA CGTKLMRENF IGAAGLNRAM RFLIDSHDER SDEDFYELVG
210 220 230 240
DDDGIFGCMS LIGCHDTCPK EIPLQDSLAQ LRNRMVKVGR SR
Length:242
Mass (Da):27,388
Last modified:September 21, 2011 - v1
Checksum:iDFB1E8FE82B1E350
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR871757 Genomic DNA. Translation: CCB79178.1.
RefSeqiWP_013889684.1. NC_015674.1.

Genome annotation databases

EnsemblBacteriaiCCB79178; CCB79178; HBZC1_01920.
KEGGihbi:HBZC1_01920.

Similar proteinsi

Entry informationi

Entry nameiF8KR11_HELBC
AccessioniPrimary (citable) accession number: F8KR11
Entry historyiIntegrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: December 20, 2017
This is version 30 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported