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F8JVS3 (F8JVS3_STREN) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length227 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. SAAS SAAS020634 HAMAP-Rule MF_00124

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00124

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00124.

Sequence similarities

Belongs to the thymidine kinase family. HAMAP-Rule MF_00124

Ontologies

Keywords
   Biological processDNA synthesis SAAS SAAS020634 HAMAP-Rule MF_00124
   Cellular componentCytoplasm HAMAP-Rule MF_00124
   LigandATP-binding SAAS SAAS020634 HAMAP-Rule MF_00124
Nucleotide-binding
   Molecular functionKinase SAAS SAAS020634 HAMAP-Rule MF_00124 EMBL CCB77310.1
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA replication

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

thymidine kinase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding9 – 168ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding86 – 894ATP By similarity HAMAP-Rule MF_00124

Sites

Active site871Proton acceptor By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
F8JVS3 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: C55A8602714EEAE8

FASTA22724,492
        10         20         30         40         50         60 
MSELVYFCGT MDCGKSTLAL QIEHNRSARG LHGMIFTRND RAGTGVLSSR LGLSTKAVEA 

        70         80         90        100        110        120 
GDDLDFYVHV VDHLSGGGRV DYVIADEAQF FTPEQVDQLA RVVDDLGLDV YAFGITTDFR 

       130        140        150        160        170        180 
TRLFPGSARL VELADRIEVL QVEALCWCGA RATHNARTVD GRMVVEGAQV VVGDVNGSAG 

       190        200        210        220 
EVGYEVLCRR HHTRRMTAAT ARAAALSPDV LPVDTPAARA MEPVPDA 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Streptomyces cattleya NRRL 8057, a producer of antibiotics and fluorometabolites."
Barbe V., Bouzon M., Mangenot S., Badet B., Poulain J., Segurens B., Vallenet D., Marliere P., Weissenbach J.
J. Bacteriol. 193:5055-5056(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057 and NRRL 8057 EMBL CCB77310.1.
[2]Genoscope - CEA
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: NRRL 8057 EMBL CCB77310.1.
[3]"Complete genome sequence of Streptomyces cattleya strain DSM 46488."
Ou H.-Y., Li P., Zhao C., O'Hagan D., Deng Z.
Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057.
[4]Ou H.-Y., Li P., Zhao C., O'Hagan D., Deng Z.
Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DSM 46488 EMBL AEW96984.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003219 Genomic DNA. Translation: AEW96984.1.
FQ859185 Genomic DNA. Translation: CCB77310.1.
RefSeqYP_004914113.1. NC_016111.1.
YP_006056506.1. NC_017586.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEW96984; AEW96984; SCATT_46130.
CCB77310; CCB77310; SCAT_4622.
GeneID11358840.
12651383.
KEGGsct:SCAT_4622.
scy:SCATT_46130.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00857.

Enzyme and pathway databases

BioCycSCAT1003195:GJCM-4660-MONOMER.

Family and domain databases

HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF8JVS3_STREN
AccessionPrimary (citable) accession number: F8JVS3
Secondary accession number(s): G8X3D3
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: June 11, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)