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F8JQI3 (F8JQI3_STREN) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length313 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL CCB78145.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA ligation involved in DNA repair

Inferred from electronic annotation. Source: InterPro

DNA recombination

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F8JQI3 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 035BB2AD648C5C62

FASTA31335,234
        10         20         30         40         50         60 
MPDRVTPMLA VLSDRRHFDD TWVLERKLDG VRAIGFRDGD TVRLASRTGQ RLENTYPEIV 

        70         80         90        100        110        120 
RALADQPQRA FVVDGEIVAL DDGRTSFERL QRRMQLTRPS AALASGVAVT YFLFDLLHLA 

       130        140        150        160        170        180 
GHDTTGLPLR SRKELLREAV RYTGPLRYTE HHTATGDAGQ LLDAACAQGW EGLIAKRADG 

       190        200        210        220        230        240 
RYQQRRSSDW LKLKCLTAQE FVVGGYTEPA GSRAGFGALL LGYHQGGRLR YAGKVGTGYD 

       250        260        270        280        290        300 
TATLRRLRGL LDERGLTEPP FAEPVRERGA HWVRPDLVVQ VAFTEWTRDG RLRAPRYLGL 

       310 
RQDKRPERVV REG 

« Hide

References

[1]"Complete genome sequence of Streptomyces cattleya NRRL 8057, a producer of antibiotics and fluorometabolites."
Barbe V., Bouzon M., Mangenot S., Badet B., Poulain J., Segurens B., Vallenet D., Marliere P., Weissenbach J.
J. Bacteriol. 193:5055-5056(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FQ859185 Genomic DNA. Translation: CCB78145.1.
RefSeqYP_004914948.1. NC_016111.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCB78145; CCB78145; SCAT_5457.
GeneID11355980.
KEGGsct:SCAT_5457.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycSCAT1003195:GJCM-5506-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF8JQI3_STREN
AccessionPrimary (citable) accession number: F8JQI3
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: December 11, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)