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F8JNS6 (F8JNS6_STREN) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length597 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Sequences

Sequence LengthMass (Da)Tools
F8JNS6 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: B955E40EF88BBE8C

FASTA59763,025
        10         20         30         40         50         60 
MLRHAHDRPA RRRPSRLRAA LASGALLTAG LVPLTLTAAA GPARAATPSG DVIANLFMWN 

        70         80         90        100        110        120 
WPSVARECTD VLGPDGYGGV QVAPPADSLS TSGHPWWEVY QPVDYHLTSR MGDESAFRSM 

       130        140        150        160        170        180 
VATCRKAGVK VYVDAVINHT SGVDGTSYGG VTYTKYAYPD YTDADFHHYP ADCPQSDGQI 

       190        200        210        220        230        240 
HNWNDYTEVT HCELLHLADL RTESAHVRTT LTSYLDKLID YGVSGFRVDA AKHIGHEDLA 

       250        260        270        280        290        300 
AIEAQLHTTA DGTRPYIAQE IAPGGTGDLS PASFENTGDV LGFDYADGLK SAFTGSLASL 

       310        320        330        340        350        360 
RNFSAGLLGS DQEEVFVQNH DTERDGSTLS YRDGAVNTLA TEFELAYGYG TPQVYAGFDF 

       370        380        390        400        410        420 
TGKDDSPPAD ASGHVTDTTC GTGWECTDRI PGVAAMVGWH DTVAGAPVAD WYDDGADLIA 

       430        440        450        460        470        480 
FGRGGKGWIA LNNGSTAQQR TFATGLPAGS YCDVIHGRAT ATGPCTGPAV TVDAAGDATV 

       490        500        510        520        530        540 
TVPAKDAVAI DVAARGTSTT ATVPVSFDPT VTTWYGQNVY VTGSLPALGG WDPGKAVALS 

       550        560        570        580        590 
PADYPVWKAT VALPANTPFE YKYVKKDPDG TVEWESGGNR TATTGASGGL TLNDTWK 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Streptomyces cattleya NRRL 8057, a producer of antibiotics and fluorometabolites."
Barbe V., Bouzon M., Mangenot S., Badet B., Poulain J., Segurens B., Vallenet D., Marliere P., Weissenbach J.
J. Bacteriol. 193:5055-5056(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057 and NRRL 8057 EMBL CCB73011.1.
[2]Genoscope - CEA
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: NRRL 8057 EMBL CCB73011.1.
[3]"Complete genome sequence of Streptomyces cattleya strain DSM 46488."
Ou H.-Y., Li P., Zhao C., O'Hagan D., Deng Z.
Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057.
[4]Ou H.-Y., Li P., Zhao C., O'Hagan D., Deng Z.
Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DSM 46488 EMBL AEW92655.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003219 Genomic DNA. Translation: AEW92655.1.
FQ859185 Genomic DNA. Translation: CCB73011.1.
RefSeqYP_004909818.1. NC_016111.1.
YP_006052178.1. NC_017586.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEW92655; AEW92655; SCATT_02840.
CCB73011; CCB73011; SCAT_0273.
GeneID11356503.
12647055.
KEGGsct:SCAT_0273.
scy:SCATT_02840.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Enzyme and pathway databases

BioCycSCAT1003195:GJCM-274-MONOMER.

Family and domain databases

Gene3D2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEPS51166. CBM20. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF8JNS6_STREN
AccessionPrimary (citable) accession number: F8JNS6
Secondary accession number(s): G8WMT7
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: December 11, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)