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F8JJ69 (F8JJ69_STREN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Isocitrate dehydrogenase [NADP] EMBL CCB72125.1
EC=1.1.1.42 EMBL CCB72125.1
Gene names
Name:icd EMBL CCB72125.1
Ordered Locus Names:SCAT_p1101 EMBL CCB72125.1, SCATT_p06340 EMBL AEW98827.1
Encoded onPlasmid pSCAT Ref.2 EMBL CCB72125.1
Plasmid pSCATT Ref.4 EMBL AEW98827.1
OrganismStreptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) [Complete proteome] [HAMAP] EMBL CCB72125.1
Taxonomic identifier1003195 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces

Protein attributes

Sequence length739 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Binds 1 magnesium or manganese ion per subunit By similarity. PIRSR PIRSR009407-3

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region132 – 1398Substrate binding By similarity PIRSR PIRSR009407-2

Sites

Metal binding3481Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5461Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5501Magnesium or manganese By similarity PIRSR PIRSR009407-3
Binding site1451Substrate By similarity PIRSR PIRSR009407-2
Binding site5451Substrate By similarity PIRSR PIRSR009407-2
Site2551Critical for catalysis By similarity PIRSR PIRSR009407-1
Site4181Critical for catalysis By similarity PIRSR PIRSR009407-1

Sequences

Sequence LengthMass (Da)Tools
F8JJ69 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 7B3C32C5E0D4769C

FASTA73979,673
        10         20         30         40         50         60 
MTDSTIIYTH TDEAPALATY SFLPVVEAYA SKAGVTVETR DISLAGRILA VFPEYLEEGQ 

        70         80         90        100        110        120 
RIDDALAELG ELAKTPGANI IKLPNISASI PQLKAAVAEL REQGYALPEY PDDPKTDEER 

       130        140        150        160        170        180 
EIRARYDKVK GSAVNPVLRE GNSDRRAPAS VKNYAKTHPH RMGAWTADSK TNVAHMTGDD 

       190        200        210        220        230        240 
FRSTEKSAVV AEAGSLRIEL AGDDGTTTVL RESVPVLAGE VVDASVMRVA ALREFLAAQV 

       250        260        270        280        290        300 
ARAKAEGVLF SVHLKATMMK VSDPIVFGHV VRAFFPKTFA KYGEVLASAG LTPNDGLGGI 

       310        320        330        340        350        360 
FKGLEGLPEG AEIKASFDAE LGEGPALAMV DSDRGITNLH VPSDVIVDAS MPAMIRTSGH 

       370        380        390        400        410        420 
MWGPDGKEAD TLAVLPDSSY AGVYQAVIDD CRANGAFDPA TMGSVPNVGL MAQKAEEYGS 

       430        440        450        460        470        480 
HDKTFEIPTT GTVRVVDEAG EVVLQQTVSA GDIFRMCQTK DLPVRDWVKL AVTRARATGD 

       490        500        510        520        530        540 
PAVFWLDETR AHDAQLITKV EAYLAEHDTE GLDIRVMSPV EATKFSLERI RRGENTISVT 

       550        560        570        580        590        600 
GNVLRDYLTD LFPILELGTS AKMLSIVPLM AGGGLFETGA GGSAPKHVQQ LVKENYLRWD 

       610        620        630        640        650        660 
SLGEFFALVP SLEQYAKTTG NTRAQVLADT LDRATATFLD EDKSPTRRIG GIDNRGSHFY 

       670        680        690        700        710        720 
LAMYWAQELA RQTEDAQLAE AFADLARTLT EQESTIVDEL NAVQGEPADI GGYYKPDPAK 

       730 
AAAVMRPSET FNRAIASLS 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Streptomyces cattleya NRRL 8057, a producer of antibiotics and fluorometabolites."
Barbe V., Bouzon M., Mangenot S., Badet B., Poulain J., Segurens B., Vallenet D., Marliere P., Weissenbach J.
J. Bacteriol. 193:5055-5056(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057 and NRRL 8057 EMBL CCB72125.1.
[2]Genoscope - CEA
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: NRRL 8057 EMBL CCB72125.1.
[3]"Complete genome sequence of Streptomyces cattleya strain DSM 46488."
Ou H.-Y., Li P., Zhao C., O'Hagan D., Deng Z.
Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057.
[4]Ou H.-Y., Li P., Zhao C., O'Hagan D., Deng Z.
Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DSM 46488 EMBL AEW98827.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003229 Genomic DNA. Translation: AEW98827.1.
FQ859184 Genomic DNA. Translation: CCB72125.1.
RefSeqYP_004920391.1. NC_016113.1.
YP_006050780.1. NC_017585.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEW98827; AEW98827; SCATT_p06340.
CCB72125; CCB72125; SCAT_p1101.
GeneID11364637.
12645654.
KEGGsct:SCAT_p1101.
scy:SCATT_p06340.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00031.

Enzyme and pathway databases

BioCycSCAT1003195:GJCM-6970-MONOMER.

Family and domain databases

Gene3D3.40.718.10. 3 hits.
InterProIPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PfamPF03971. IDH. 1 hit.
[Graphical view]
PIRSFPIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsTIGR00178. monomer_idh. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF8JJ69_STREN
AccessionPrimary (citable) accession number: F8JJ69
Secondary accession number(s): G8XH81
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: April 16, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)