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Protein
Submitted name:

2-oxoglutarate dehydrogenase complex, E1 component, 2-oxoglutarate decarboxylase, thiamine binding

Gene

sucA

Organism
Hyphomicrobium sp. (strain MC1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciHSP717785:GJ7O-4538-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoglutarate dehydrogenase complex, E1 component, 2-oxoglutarate decarboxylase, thiamine bindingImported (EC:1.2.4.2Imported)
Gene namesi
Name:sucAImported
Ordered Locus Names:HYPMC_4525Imported
OrganismiHyphomicrobium sp. (strain MC1)Imported
Taxonomic identifieri717785 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesHyphomicrobiaceaeHyphomicrobium
ProteomesiUP000000494 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi717785.HYPMC_4525.

Structurei

3D structure databases

ProteinModelPortaliF8JD07.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK00164.
OMAiQNQGAWF.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

F8JD07-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARNGQNEAF LRTSFLSAAN APYIEDMQAE YERNPGAVSD EWRRFFESIK
60 70 80 90 100
EAPTQLTGYA GGPAWAPPLS ALLEESGTDK DLVGALTGDY GETERTIRDK
110 120 130 140 150
IERRAQISGF EMTPAASLRA TQDSIRALML IRAYRVIGHL AADLDPLGLA
160 170 180 190 200
DRRVHRELLP ETYGFTEADL DRPIFIDRVM GLETATMRQI LTILRRTYCR
210 220 230 240 250
KIGVQFTHIT DPTQKGWIQE RIEGPEKDVR FTPEGQKAIL KKLIETETFE
260 270 280 290 300
KFCDIKYTGT KRFGLDGAES IIPALEQIIK RGGHLGVQEI AMGMAHRGRL
310 320 330 340 350
NVLANVMSKP LRAIFKEFKG GSFKPDDVEG SGDVKYHLGA SSDRMFDGNS
360 370 380 390 400
VHLSLTANPS HLEIVDPVVL GKVRAKQDQR NCPSNDRTAV MPLLIHGDAA
410 420 430 440 450
FAGQGVVAEC FGLSGLRGHR TGGSIHFIIN NQIGFTTAPH HSRSSPYCSD
460 470 480 490 500
VALMIEAPIF HVNGDSPEAV VHVAKIATEF RQRFQKPVVI DMFCYRRHGH
510 520 530 540 550
NEADEPLFTQ PAMYKRIKSH PTVVDIYSKD LIDEGIITQA EFAAMKDEVR
560 570 580 590 600
GNLDNEFSFS DGYKPNKADW LDGRWSGITR PDSDDWRGNT GVEIETLKDI
610 620 630 640 650
GHRVTTIPND FQIHKTVGKL IERRREMIDT GQGIDWAMAE HMAFASLLME
660 670 680 690 700
GFRVRLSGQD CERGTFSQRH AVFIDQESER RFSPLKHLSP NQARFEIVNS
710 720 730 740 750
MLSEEAVLGF EYGYSLAEPN ALTLWEAQFG DFANGAQVIF DQFLSSGERK
760 770 780 790 800
WLRMSGLVCL LPHGYEGQGP EHSSARLERY LQLSAEDNWQ VANCSTPANY
810 820 830 840 850
FHILRRQLHR NFRKPLILMT PKSLLRHKRV VSKIEDFGPT TSFHRLLWDD
860 870 880 890 900
AERGSSSITL KPDAEIKRVV ICTGKVYYDL LEARDAKGLD DVYILRVEQL
910 920 930 940 950
YPFPARALIN ELGRFKFAEI VWCQEEPKNM GAWYFMDANI EWVLNHLGYI
960 970 980
HRRPRYAGRP ASAATATGLL SQHIKEQTAL VADALGI
Length:987
Mass (Da):111,200
Last modified:September 21, 2011 - v1
Checksum:i743C1F387F2B9DE4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FQ859181 Genomic DNA. Translation: CCB67734.1.
RefSeqiWP_013950124.1. NC_015717.1.

Genome annotation databases

EnsemblBacteriaiCCB67734; CCB67734; HYPMC_4525.
KEGGihmc:HYPMC_4525.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FQ859181 Genomic DNA. Translation: CCB67734.1.
RefSeqiWP_013950124.1. NC_015717.1.

3D structure databases

ProteinModelPortaliF8JD07.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi717785.HYPMC_4525.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCB67734; CCB67734; HYPMC_4525.
KEGGihmc:HYPMC_4525.

Phylogenomic databases

KOiK00164.
OMAiQNQGAWF.

Enzyme and pathway databases

BioCyciHSP717785:GJ7O-4538-MONOMER.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The complete genome of Hyphomicrobium sp. MC1."
    Genoscope.
    Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MC1Imported.

Entry informationi

Entry nameiF8JD07_HYPSM
AccessioniPrimary (citable) accession number: F8JD07
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: July 22, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.