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F8JD07

- F8JD07_HYPSM

UniProt

F8JD07 - F8JD07_HYPSM

Protein
Submitted name:

2-oxoglutarate dehydrogenase complex, E1 component, 2-oxoglutarate decarboxylase, thiamine binding

Gene

sucA

Organism
Hyphomicrobium sp. (strain MC1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 13 (01 Oct 2014)
      Sequence version 1 (21 Sep 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
    2. thiamine pyrophosphate binding Source: InterPro

    GO - Biological processi

    1. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    OxidoreductaseImported

    Enzyme and pathway databases

    BioCyciHSP717785:GJ7O-4538-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    2-oxoglutarate dehydrogenase complex, E1 component, 2-oxoglutarate decarboxylase, thiamine bindingImported (EC:1.2.4.2Imported)
    Gene namesi
    Name:sucAImported
    Ordered Locus Names:HYPMC_4525Imported
    OrganismiHyphomicrobium sp. (strain MC1)Imported
    Taxonomic identifieri717785 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesHyphomicrobiaceaeHyphomicrobium
    ProteomesiUP000000494: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliF8JD07.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK00164.

    Family and domain databases

    Gene3Di3.40.50.970. 2 hits.
    InterProiIPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view]
    PANTHERiPTHR23152. PTHR23152. 1 hit.
    PfamiPF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTiSM00861. Transket_pyr. 1 hit.
    [Graphical view]
    SUPFAMiSSF52518. SSF52518. 2 hits.
    TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    F8JD07-1 [UniParc]FASTAAdd to Basket

    « Hide

    MARNGQNEAF LRTSFLSAAN APYIEDMQAE YERNPGAVSD EWRRFFESIK    50
    EAPTQLTGYA GGPAWAPPLS ALLEESGTDK DLVGALTGDY GETERTIRDK 100
    IERRAQISGF EMTPAASLRA TQDSIRALML IRAYRVIGHL AADLDPLGLA 150
    DRRVHRELLP ETYGFTEADL DRPIFIDRVM GLETATMRQI LTILRRTYCR 200
    KIGVQFTHIT DPTQKGWIQE RIEGPEKDVR FTPEGQKAIL KKLIETETFE 250
    KFCDIKYTGT KRFGLDGAES IIPALEQIIK RGGHLGVQEI AMGMAHRGRL 300
    NVLANVMSKP LRAIFKEFKG GSFKPDDVEG SGDVKYHLGA SSDRMFDGNS 350
    VHLSLTANPS HLEIVDPVVL GKVRAKQDQR NCPSNDRTAV MPLLIHGDAA 400
    FAGQGVVAEC FGLSGLRGHR TGGSIHFIIN NQIGFTTAPH HSRSSPYCSD 450
    VALMIEAPIF HVNGDSPEAV VHVAKIATEF RQRFQKPVVI DMFCYRRHGH 500
    NEADEPLFTQ PAMYKRIKSH PTVVDIYSKD LIDEGIITQA EFAAMKDEVR 550
    GNLDNEFSFS DGYKPNKADW LDGRWSGITR PDSDDWRGNT GVEIETLKDI 600
    GHRVTTIPND FQIHKTVGKL IERRREMIDT GQGIDWAMAE HMAFASLLME 650
    GFRVRLSGQD CERGTFSQRH AVFIDQESER RFSPLKHLSP NQARFEIVNS 700
    MLSEEAVLGF EYGYSLAEPN ALTLWEAQFG DFANGAQVIF DQFLSSGERK 750
    WLRMSGLVCL LPHGYEGQGP EHSSARLERY LQLSAEDNWQ VANCSTPANY 800
    FHILRRQLHR NFRKPLILMT PKSLLRHKRV VSKIEDFGPT TSFHRLLWDD 850
    AERGSSSITL KPDAEIKRVV ICTGKVYYDL LEARDAKGLD DVYILRVEQL 900
    YPFPARALIN ELGRFKFAEI VWCQEEPKNM GAWYFMDANI EWVLNHLGYI 950
    HRRPRYAGRP ASAATATGLL SQHIKEQTAL VADALGI 987
    Length:987
    Mass (Da):111,200
    Last modified:September 21, 2011 - v1
    Checksum:i743C1F387F2B9DE4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FQ859181 Genomic DNA. Translation: CCB67734.1.
    RefSeqiYP_004678298.1. NC_015717.1.

    Genome annotation databases

    EnsemblBacteriaiCCB67734; CCB67734; HYPMC_4525.
    GeneIDi10894176.
    KEGGihmc:HYPMC_4525.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FQ859181 Genomic DNA. Translation: CCB67734.1 .
    RefSeqi YP_004678298.1. NC_015717.1.

    3D structure databases

    ProteinModelPortali F8JD07.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CCB67734 ; CCB67734 ; HYPMC_4525 .
    GeneIDi 10894176.
    KEGGi hmc:HYPMC_4525.

    Phylogenomic databases

    KOi K00164.

    Enzyme and pathway databases

    BioCyci HSP717785:GJ7O-4538-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.970. 2 hits.
    InterProi IPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view ]
    PANTHERi PTHR23152. PTHR23152. 1 hit.
    Pfami PF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTi SM00861. Transket_pyr. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52518. SSF52518. 2 hits.
    TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The complete genome of Hyphomicrobium sp. MC1."
      Genoscope.
      Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: MC1Imported.

    Entry informationi

    Entry nameiF8JD07_HYPSM
    AccessioniPrimary (citable) accession number: F8JD07
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 21, 2011
    Last sequence update: September 21, 2011
    Last modified: October 1, 2014
    This is version 13 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3