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F8JD07

- F8JD07_HYPSM

UniProt

F8JD07 - F8JD07_HYPSM

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Protein
Submitted name:

2-oxoglutarate dehydrogenase complex, E1 component, 2-oxoglutarate decarboxylase, thiamine binding

Gene

sucA

Organism
Hyphomicrobium sp. (strain MC1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciHSP717785:GJ7O-4538-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoglutarate dehydrogenase complex, E1 component, 2-oxoglutarate decarboxylase, thiamine bindingImported (EC:1.2.4.2Imported)
Gene namesi
Name:sucAImported
Ordered Locus Names:HYPMC_4525Imported
OrganismiHyphomicrobium sp. (strain MC1)Imported
Taxonomic identifieri717785 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesHyphomicrobiaceaeHyphomicrobium
ProteomesiUP000000494: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF8JD07.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK00164.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

F8JD07-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MARNGQNEAF LRTSFLSAAN APYIEDMQAE YERNPGAVSD EWRRFFESIK
60 70 80 90 100
EAPTQLTGYA GGPAWAPPLS ALLEESGTDK DLVGALTGDY GETERTIRDK
110 120 130 140 150
IERRAQISGF EMTPAASLRA TQDSIRALML IRAYRVIGHL AADLDPLGLA
160 170 180 190 200
DRRVHRELLP ETYGFTEADL DRPIFIDRVM GLETATMRQI LTILRRTYCR
210 220 230 240 250
KIGVQFTHIT DPTQKGWIQE RIEGPEKDVR FTPEGQKAIL KKLIETETFE
260 270 280 290 300
KFCDIKYTGT KRFGLDGAES IIPALEQIIK RGGHLGVQEI AMGMAHRGRL
310 320 330 340 350
NVLANVMSKP LRAIFKEFKG GSFKPDDVEG SGDVKYHLGA SSDRMFDGNS
360 370 380 390 400
VHLSLTANPS HLEIVDPVVL GKVRAKQDQR NCPSNDRTAV MPLLIHGDAA
410 420 430 440 450
FAGQGVVAEC FGLSGLRGHR TGGSIHFIIN NQIGFTTAPH HSRSSPYCSD
460 470 480 490 500
VALMIEAPIF HVNGDSPEAV VHVAKIATEF RQRFQKPVVI DMFCYRRHGH
510 520 530 540 550
NEADEPLFTQ PAMYKRIKSH PTVVDIYSKD LIDEGIITQA EFAAMKDEVR
560 570 580 590 600
GNLDNEFSFS DGYKPNKADW LDGRWSGITR PDSDDWRGNT GVEIETLKDI
610 620 630 640 650
GHRVTTIPND FQIHKTVGKL IERRREMIDT GQGIDWAMAE HMAFASLLME
660 670 680 690 700
GFRVRLSGQD CERGTFSQRH AVFIDQESER RFSPLKHLSP NQARFEIVNS
710 720 730 740 750
MLSEEAVLGF EYGYSLAEPN ALTLWEAQFG DFANGAQVIF DQFLSSGERK
760 770 780 790 800
WLRMSGLVCL LPHGYEGQGP EHSSARLERY LQLSAEDNWQ VANCSTPANY
810 820 830 840 850
FHILRRQLHR NFRKPLILMT PKSLLRHKRV VSKIEDFGPT TSFHRLLWDD
860 870 880 890 900
AERGSSSITL KPDAEIKRVV ICTGKVYYDL LEARDAKGLD DVYILRVEQL
910 920 930 940 950
YPFPARALIN ELGRFKFAEI VWCQEEPKNM GAWYFMDANI EWVLNHLGYI
960 970 980
HRRPRYAGRP ASAATATGLL SQHIKEQTAL VADALGI
Length:987
Mass (Da):111,200
Last modified:September 21, 2011 - v1
Checksum:i743C1F387F2B9DE4
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FQ859181 Genomic DNA. Translation: CCB67734.1.
RefSeqiYP_004678298.1. NC_015717.1.

Genome annotation databases

EnsemblBacteriaiCCB67734; CCB67734; HYPMC_4525.
GeneIDi10894176.
KEGGihmc:HYPMC_4525.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FQ859181 Genomic DNA. Translation: CCB67734.1 .
RefSeqi YP_004678298.1. NC_015717.1.

3D structure databases

ProteinModelPortali F8JD07.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CCB67734 ; CCB67734 ; HYPMC_4525 .
GeneIDi 10894176.
KEGGi hmc:HYPMC_4525.

Phylogenomic databases

KOi K00164.

Enzyme and pathway databases

BioCyci HSP717785:GJ7O-4538-MONOMER.

Family and domain databases

Gene3Di 3.40.50.970. 2 hits.
InterProi IPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view ]
PANTHERi PTHR23152. PTHR23152. 1 hit.
Pfami PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view ]
PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTi SM00861. Transket_pyr. 1 hit.
[Graphical view ]
SUPFAMi SSF52518. SSF52518. 2 hits.
TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The complete genome of Hyphomicrobium sp. MC1."
    Genoscope.
    Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MC1Imported.

Entry informationi

Entry nameiF8JD07_HYPSM
AccessioniPrimary (citable) accession number: F8JD07
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: October 1, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3