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Protein
Submitted name:

ATP dependent DNA ligase

Gene

lig

Organism
Alicyclobacillus acidocaldarius (strain Tc-4-1) (Bacillus acidocaldarius)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciAACI1048834:GL7E-1550-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Name:ligImported
Ordered Locus Names:TC41_1545Imported
OrganismiAlicyclobacillus acidocaldarius (strain Tc-4-1) (Bacillus acidocaldarius)Imported
Taxonomic identifieri1048834 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesAlicyclobacillaceaeAlicyclobacillus
ProteomesiUP000000292 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi1048834.TC41_1545.

Structurei

3D structure databases

ProteinModelPortaliF8IJW5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F8IJW5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPFFRPFEPL SSAVVPTGGA WIAQVKWDGV RAVAEVSDAG VQIWNRHGRL
60 70 80 90 100
RTDRYPEIAS ALRPFRGCAF DGEVVALAQG RPDFYRVLRR ERAVTSREIE
110 120 130 140 150
RLVREIPVWY AVFDVVQMSG KWVGDWPLAK RLGWMVEHVS GVEHVLATES
160 170 180 190 200
EVDTEALFAA TKQLGLEGIV CKRVDSTYAP GHRDGRWVKV KHARNAIAAV
210 220 230 240 250
GGVMYRDGAP NALMLGLFDD QARLIHVGNA GAGRLPHRAW ELLVKRVLSH
260 270 280 290 300
EITLPPFANA PKVVRPCRFA HPVVAVKVRF AEWTPKGTMR HPVLLAELDI
310
PATPAACSFA QADP
Length:314
Mass (Da):34,827
Last modified:September 21, 2011 - v1
Checksum:i4811607CFB5FE1F3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002902 Genomic DNA. Translation: AEJ43477.1.
RefSeqiWP_014464346.1. NC_017167.1.

Genome annotation databases

EnsemblBacteriaiAEJ43477; AEJ43477; TC41_1545.
KEGGiaad:TC41_1545.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002902 Genomic DNA. Translation: AEJ43477.1.
RefSeqiWP_014464346.1. NC_017167.1.

3D structure databases

ProteinModelPortaliF8IJW5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi1048834.TC41_1545.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEJ43477; AEJ43477; TC41_1545.
KEGGiaad:TC41_1545.

Phylogenomic databases

KOiK01971.

Enzyme and pathway databases

BioCyciAACI1048834:GL7E-1550-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The complete genome sequence of Alicyclobacillus acidocaldarius sp. Tc-4-1."
    Chen Y., He Y., Dong Z., Hu S.
    Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Tc-4-1Imported.

Entry informationi

Entry nameiF8IJW5_ALIAT
AccessioniPrimary (citable) accession number: F8IJW5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: July 22, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.