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F8IJW5

- F8IJW5_ALIAT

UniProt

F8IJW5 - F8IJW5_ALIAT

Protein
Submitted name:

ATP dependent DNA ligase

Gene

lig

Organism
Alicyclobacillus acidocaldarius (strain Tc-4-1) (Bacillus acidocaldarius)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 15 (01 Oct 2014)
      Sequence version 1 (21 Sep 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciAACI1048834:GL7E-1550-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Name:ligImported
    Ordered Locus Names:TC41_1545Imported
    OrganismiAlicyclobacillus acidocaldarius (strain Tc-4-1) (Bacillus acidocaldarius)Imported
    Taxonomic identifieri1048834 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesAlicyclobacillaceaeAlicyclobacillus
    ProteomesiUP000000292: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliF8IJW5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F8IJW5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPFFRPFEPL SSAVVPTGGA WIAQVKWDGV RAVAEVSDAG VQIWNRHGRL    50
    RTDRYPEIAS ALRPFRGCAF DGEVVALAQG RPDFYRVLRR ERAVTSREIE 100
    RLVREIPVWY AVFDVVQMSG KWVGDWPLAK RLGWMVEHVS GVEHVLATES 150
    EVDTEALFAA TKQLGLEGIV CKRVDSTYAP GHRDGRWVKV KHARNAIAAV 200
    GGVMYRDGAP NALMLGLFDD QARLIHVGNA GAGRLPHRAW ELLVKRVLSH 250
    EITLPPFANA PKVVRPCRFA HPVVAVKVRF AEWTPKGTMR HPVLLAELDI 300
    PATPAACSFA QADP 314
    Length:314
    Mass (Da):34,827
    Last modified:September 21, 2011 - v1
    Checksum:i4811607CFB5FE1F3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002902 Genomic DNA. Translation: AEJ43477.1.
    RefSeqiWP_014464346.1. NC_017167.1.
    YP_005517996.1. NC_017167.1.

    Genome annotation databases

    EnsemblBacteriaiAEJ43477; AEJ43477; TC41_1545.
    GeneIDi12106477.
    KEGGiaad:TC41_1545.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002902 Genomic DNA. Translation: AEJ43477.1 .
    RefSeqi WP_014464346.1. NC_017167.1.
    YP_005517996.1. NC_017167.1.

    3D structure databases

    ProteinModelPortali F8IJW5.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEJ43477 ; AEJ43477 ; TC41_1545 .
    GeneIDi 12106477.
    KEGGi aad:TC41_1545.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci AACI1048834:GL7E-1550-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The complete genome sequence of Alicyclobacillus acidocaldarius sp. Tc-4-1."
      Chen Y., He Y., Dong Z., Hu S.
      Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Tc-4-1Imported.

    Entry informationi

    Entry nameiF8IJW5_ALIAT
    AccessioniPrimary (citable) accession number: F8IJW5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 21, 2011
    Last sequence update: September 21, 2011
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3