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F8IJW5 (F8IJW5_ALIAT) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
ATP dependent DNA ligase EMBL AEJ43477.1
Gene names
Name:lig EMBL AEJ43477.1
Ordered Locus Names:TC41_1545 EMBL AEJ43477.1
OrganismAlicyclobacillus acidocaldarius (strain Tc-4-1) (Bacillus acidocaldarius) [Complete proteome] [HAMAP]
Taxonomic identifier1048834 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Alicyclobacillaceae › Alicyclobacillus ›

Protein attributes

Sequence length314 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEJ43477.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA ligation involved in DNA repair

Inferred from electronic annotation. Source: InterPro

DNA recombination

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F8IJW5 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 4811607CFB5FE1F3

FASTA31434,827
        10         20         30         40         50         60 
MPFFRPFEPL SSAVVPTGGA WIAQVKWDGV RAVAEVSDAG VQIWNRHGRL RTDRYPEIAS 

        70         80         90        100        110        120 
ALRPFRGCAF DGEVVALAQG RPDFYRVLRR ERAVTSREIE RLVREIPVWY AVFDVVQMSG 

       130        140        150        160        170        180 
KWVGDWPLAK RLGWMVEHVS GVEHVLATES EVDTEALFAA TKQLGLEGIV CKRVDSTYAP 

       190        200        210        220        230        240 
GHRDGRWVKV KHARNAIAAV GGVMYRDGAP NALMLGLFDD QARLIHVGNA GAGRLPHRAW 

       250        260        270        280        290        300 
ELLVKRVLSH EITLPPFANA PKVVRPCRFA HPVVAVKVRF AEWTPKGTMR HPVLLAELDI 

       310 
PATPAACSFA QADP

« Hide

References

[1]"The complete genome sequence of Alicyclobacillus acidocaldarius sp. Tc-4-1."
Chen Y., He Y., Dong Z., Hu S.
Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tc-4-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002902 Genomic DNA. Translation: AEJ43477.1.
RefSeqYP_005517996.1. NC_017167.1.

3D structure databases

ProteinModelPortalF8IJW5.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEJ43477; AEJ43477; TC41_1545.
GeneID12106477.
KEGGaad:TC41_1545.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycAACI1048834:GL7E-1550-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF8IJW5_ALIAT
AccessionPrimary (citable) accession number: F8IJW5
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: May 29, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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