Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

DNA polymerase LigD, polymerase domain protein

Gene

lig

Organism
Alicyclobacillus acidocaldarius (strain Tc-4-1) (Bacillus acidocaldarius)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciAACI1048834:GL7E-1549-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, polymerase domain proteinImported
Gene namesi
Name:ligImported
Ordered Locus Names:TC41_1544Imported
OrganismiAlicyclobacillus acidocaldarius (strain Tc-4-1) (Bacillus acidocaldarius)Imported
Taxonomic identifieri1048834 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesAlicyclobacillaceaeAlicyclobacillus
ProteomesiUP000000292: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

InterProiIPR014145. LigD_pol.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

F8IJW4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKRMKRRETP PTLTHGDKIY FPGAGLNKRD YMTYLAQIGA HLVRHLRYRP
60 70 80 90 100
VTLVRCPDGV TGRRFYQRHL PPHAPPSLPR KEVQGERPLI AIPDVETLLY
110 120 130 140 150
YGNLGAIEFH AGLHQSDGPQ AGCPTALTFD LDPSDPNDFE RVRELALRLR
160 170 180 190 200
EVLRELELDG LAKTTGASGL QVFVPLEQPL PYAVTRPVVN FIAAYCASRW
210 220 230 240 250
PDLATTERRV HQRGSRVYVD APQHGPSRTL IAAYSVRAVE KALVSVPITW
260 270 280 290 300
DELAGGVSPD EFDLNVVPDR LARMGDLLGI APRCPSSRVQ AIHDALPPPW

RQTRVRSV
Length:308
Mass (Da):34,433
Last modified:September 21, 2011 - v1
Checksum:i69637EF0E1DB085C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002902 Genomic DNA. Translation: AEJ43476.1.
RefSeqiYP_005517995.1. NC_017167.1.

Genome annotation databases

EnsemblBacteriaiAEJ43476; AEJ43476; TC41_1544.
GeneIDi12106476.
KEGGiaad:TC41_1544.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002902 Genomic DNA. Translation: AEJ43476.1.
RefSeqiYP_005517995.1. NC_017167.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEJ43476; AEJ43476; TC41_1544.
GeneIDi12106476.
KEGGiaad:TC41_1544.

Phylogenomic databases

KOiK01971.

Enzyme and pathway databases

BioCyciAACI1048834:GL7E-1549-MONOMER.

Family and domain databases

InterProiIPR014145. LigD_pol.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The complete genome sequence of Alicyclobacillus acidocaldarius sp. Tc-4-1."
    Chen Y., He Y., Dong Z., Hu S.
    Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Tc-4-1Imported.

Entry informationi

Entry nameiF8IJW4_ALIAT
AccessioniPrimary (citable) accession number: F8IJW4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: January 7, 2015
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.