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F8IG53

- F8IG53_ALIAT

UniProt

F8IG53 - F8IG53_ALIAT

Protein

Xylose isomerase

Gene

xylA

Organism
Alicyclobacillus acidocaldarius (strain Tc-4-1) (Bacillus acidocaldarius)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 22 (01 Oct 2014)
      Sequence version 1 (21 Sep 2011)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

    Cofactori

    Binds 2 magnesium ions per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei103 – 1031UniRule annotation
    Active sitei106 – 1061UniRule annotation
    Metal bindingi234 – 2341Magnesium 1UniRule annotation
    Metal bindingi270 – 2701Magnesium 1UniRule annotation
    Metal bindingi270 – 2701Magnesium 2UniRule annotation
    Metal bindingi273 – 2731Magnesium 2UniRule annotation
    Metal bindingi298 – 2981Magnesium 1UniRule annotation
    Metal bindingi309 – 3091Magnesium 2UniRule annotation
    Metal bindingi311 – 3111Magnesium 2UniRule annotation
    Metal bindingi341 – 3411Magnesium 1UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. xylose isomerase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-xylose metabolic process Source: UniProtKB-HAMAP
    2. pentose-phosphate shunt Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciAACI1048834:GL7E-2293-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
    Gene namesi
    Name:xylAUniRule annotationImported
    Ordered Locus Names:TC41_2305Imported
    OrganismiAlicyclobacillus acidocaldarius (strain Tc-4-1) (Bacillus acidocaldarius)Imported
    Taxonomic identifieri1048834 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesAlicyclobacillaceaeAlicyclobacillus
    ProteomesiUP000000292: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotationSAAS annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotation

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotationSAAS annotation

    Structurei

    3D structure databases

    ProteinModelPortaliF8IG53.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the xylose isomerase family.UniRule annotation

    Phylogenomic databases

    KOiK01805.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    HAMAPiMF_00455. Xylose_isom_A.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    PRINTSiPR00688. XYLOSISMRASE.
    SUPFAMiSSF51658. SSF51658. 1 hit.
    TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
    PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F8IG53-1 [UniParc]FASTAAdd to Basket

    « Hide

    MMDVATYFPE VTRIAYEGKG SDNPLCFKYY NPEETVLGKP MKEHLRFSVA    50
    YWHTFTLSGA DPFGLPNMIR PWDGATGMDL AKRRVEAAFE FMTKLGVEYF 100
    CFHDRDIAPE GDTLRETNRN LDEIVALIKE YMQSTGIKLL WNTQNLFSNP 150
    RFAHGAATAP DADVFAYAAA QVKKSLEIAK ELGAENYVFW GGREGYETLL 200
    NTDLKLELDN YARLLQMAVD YADEIGFTGQ FLIEPKPKEP TKHQYDFDVQ 250
    SGLAFLYHYG LKDRFKFNIE ANHATLAGHT FQHELRFARI NGLLGSVDAN 300
    QGDPLLGWDT DEFPTNLYET TLAMYEILLN GGLAPGGLNF DAKVRRASMT 350
    PIDLFYGHIA GMDSFARGLK VAAKLLEDRV FEREIEERYE SYRAGIGKDI 400
    VEGRATLQTL ESYVLDKRVT ATRSGRQEVL LAKLNQYLLE TE 442
    Length:442
    Mass (Da):50,105
    Last modified:September 21, 2011 - v1
    Checksum:i794673C7254F3F13
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002902 Genomic DNA. Translation: AEJ44206.1.
    RefSeqiWP_014465047.1. NC_017167.1.
    YP_005518725.1. NC_017167.1.

    Genome annotation databases

    EnsemblBacteriaiAEJ44206; AEJ44206; TC41_2305.
    GeneIDi12107893.
    KEGGiaad:TC41_2305.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002902 Genomic DNA. Translation: AEJ44206.1 .
    RefSeqi WP_014465047.1. NC_017167.1.
    YP_005518725.1. NC_017167.1.

    3D structure databases

    ProteinModelPortali F8IG53.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEJ44206 ; AEJ44206 ; TC41_2305 .
    GeneIDi 12107893.
    KEGGi aad:TC41_2305.

    Phylogenomic databases

    KOi K01805.

    Enzyme and pathway databases

    BioCyci AACI1048834:GL7E-2293-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    HAMAPi MF_00455. Xylose_isom_A.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    PRINTSi PR00688. XYLOSISMRASE.
    SUPFAMi SSF51658. SSF51658. 1 hit.
    TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
    PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The complete genome sequence of Alicyclobacillus acidocaldarius sp. Tc-4-1."
      Chen Y., He Y., Dong Z., Hu S.
      Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Tc-4-1Imported.

    Entry informationi

    Entry nameiF8IG53_ALIAT
    AccessioniPrimary (citable) accession number: F8IG53
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 21, 2011
    Last sequence update: September 21, 2011
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3