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F8IG53

- F8IG53_ALIAT

UniProt

F8IG53 - F8IG53_ALIAT

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Protein

Xylose isomerase

Gene

xylA

Organism
Alicyclobacillus acidocaldarius (strain Tc-4-1) (Bacillus acidocaldarius)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

Cofactori

Binds 2 magnesium ions per subunit.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei103 – 1031UniRule annotation
Active sitei106 – 1061UniRule annotation
Metal bindingi234 – 2341Magnesium 1UniRule annotation
Metal bindingi270 – 2701Magnesium 1UniRule annotation
Metal bindingi270 – 2701Magnesium 2UniRule annotation
Metal bindingi273 – 2731Magnesium 2UniRule annotation
Metal bindingi298 – 2981Magnesium 1UniRule annotation
Metal bindingi309 – 3091Magnesium 2UniRule annotation
Metal bindingi311 – 3111Magnesium 2UniRule annotation
Metal bindingi341 – 3411Magnesium 1UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. xylose isomerase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-HAMAP
  2. pentose-phosphate shunt Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotation

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotation, Xylose metabolismUniRule annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciAACI1048834:GL7E-2293-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
Name:xylAUniRule annotationImported
Ordered Locus Names:TC41_2305Imported
OrganismiAlicyclobacillus acidocaldarius (strain Tc-4-1) (Bacillus acidocaldarius)Imported
Taxonomic identifieri1048834 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesAlicyclobacillaceaeAlicyclobacillus
ProteomesiUP000000292: Chromosome

Subcellular locationi

Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

Interactioni

Subunit structurei

Homotetramer.UniRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliF8IG53.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotation

Phylogenomic databases

KOiK01805.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00455. Xylose_isom_A.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F8IG53 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MMDVATYFPE VTRIAYEGKG SDNPLCFKYY NPEETVLGKP MKEHLRFSVA
60 70 80 90 100
YWHTFTLSGA DPFGLPNMIR PWDGATGMDL AKRRVEAAFE FMTKLGVEYF
110 120 130 140 150
CFHDRDIAPE GDTLRETNRN LDEIVALIKE YMQSTGIKLL WNTQNLFSNP
160 170 180 190 200
RFAHGAATAP DADVFAYAAA QVKKSLEIAK ELGAENYVFW GGREGYETLL
210 220 230 240 250
NTDLKLELDN YARLLQMAVD YADEIGFTGQ FLIEPKPKEP TKHQYDFDVQ
260 270 280 290 300
SGLAFLYHYG LKDRFKFNIE ANHATLAGHT FQHELRFARI NGLLGSVDAN
310 320 330 340 350
QGDPLLGWDT DEFPTNLYET TLAMYEILLN GGLAPGGLNF DAKVRRASMT
360 370 380 390 400
PIDLFYGHIA GMDSFARGLK VAAKLLEDRV FEREIEERYE SYRAGIGKDI
410 420 430 440
VEGRATLQTL ESYVLDKRVT ATRSGRQEVL LAKLNQYLLE TE
Length:442
Mass (Da):50,105
Last modified:September 21, 2011 - v1
Checksum:i794673C7254F3F13
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002902 Genomic DNA. Translation: AEJ44206.1.
RefSeqiYP_005518725.1. NC_017167.1.

Genome annotation databases

EnsemblBacteriaiAEJ44206; AEJ44206; TC41_2305.
GeneIDi12107893.
KEGGiaad:TC41_2305.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002902 Genomic DNA. Translation: AEJ44206.1 .
RefSeqi YP_005518725.1. NC_017167.1.

3D structure databases

ProteinModelPortali F8IG53.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEJ44206 ; AEJ44206 ; TC41_2305 .
GeneIDi 12107893.
KEGGi aad:TC41_2305.

Phylogenomic databases

KOi K01805.

Enzyme and pathway databases

BioCyci AACI1048834:GL7E-2293-MONOMER.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
HAMAPi MF_00455. Xylose_isom_A.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
PRINTSi PR00688. XYLOSISMRASE.
SUPFAMi SSF51658. SSF51658. 1 hit.
TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The complete genome sequence of Alicyclobacillus acidocaldarius sp. Tc-4-1."
    Chen Y., He Y., Dong Z., Hu S.
    Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Tc-4-1Imported.

Entry informationi

Entry nameiF8IG53_ALIAT
AccessioniPrimary (citable) accession number: F8IG53
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: October 29, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3