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F8HZ60 (F8HZ60_WEIKK) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length461 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-xylopyranose = D-xylulose. RuleBase RU000609 HAMAP-Rule MF_00455 SAAS SAAS001998

Cofactor

Binds 2 magnesium ions per subunit By similarity. HAMAP-Rule MF_00455

Subunit structure

Homotetramer By similarity. RuleBase RU000610 HAMAP-Rule MF_00455 SAAS SAAS001998

Subcellular location

Cytoplasm By similarity RuleBase RU000610 HAMAP-Rule MF_00455 SAAS SAAS001998.

Sequence similarities

Belongs to the xylose isomerase family. RuleBase RU000609 HAMAP-Rule MF_00455

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1121 By similarity HAMAP-Rule MF_00455
Active site1151 By similarity HAMAP-Rule MF_00455
Metal binding2431Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2791Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2791Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2821Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3071Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding3181Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3201Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3501Magnesium 1 By similarity HAMAP-Rule MF_00455

Sequences

Sequence LengthMass (Da)Tools
F8HZ60 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 3630CF72A8F39BB1

FASTA46152,444
        10         20         30         40         50         60 
MAELFDFPKV EFIGGKKGLD FEQSKGYNFY NADEEFTING ETKAMKDWLK FSVAYWHTMD 

        70         80         90        100        110        120 
QRLVDPFGEG TAVRPWDENG QDDMSDMEHA KSKVKYMFEF MDKLGVEYFA FHDRDLAPEG 

       130        140        150        160        170        180 
KTLAETNANL DIIVDMIEAE MKRTGKKLLW NTSSLFTNKR FVSGGATAPF ADVFAYAGAQ 

       190        200        210        220        230        240 
IKHSLEIAKR LNSESYVFWG GREGYDSLLN TDTKRELDHI ADFYKLAIDY AKEIGYTGQF 

       250        260        270        280        290        300 
LLEPKPKEPT THQYDTDVQT TISFLYTYGL QDNFKLNLEG NHAFLAGHTY EHEARFAREA 

       310        320        330        340        350        360 
GLLGSLDANM GDKQTGWDID EFPNDIYEAT LVMYEFIKNG GLPTGGLNFD AKARRSSFTM 

       370        380        390        400        410        420 
EDLFYGHMAG MDVYAAGFRV AYKLVQDNFF ENILKNRYAS FDSGIGADFE AGKVTFADME 

       430        440        450        460 
KYILNKEDSE ILDTVKSGRI EAIKASLNNY IYSVLGETFK K 

« Hide

References

[1]"Complete Genome Sequence of Weissella koreensis KACC 15510, Isolated from Kimchi."
Lee S.H., Jung J.Y., Lee S.H., Jeon C.O.
J. Bacteriol. 193:5534-5534(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KACC 15510 EMBL AEJ23769.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002899 Genomic DNA. Translation: AEJ23769.1.
RefSeqYP_004726448.1. NC_015759.1.

3D structure databases

ProteinModelPortalF8HZ60.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEJ23769; AEJ23769; WKK_04485.
GeneID10954208.
KEGGwko:WKK_04485.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01805.
OMASTDVEDM.

Enzyme and pathway databases

BioCycWKOR1045854:GH3T-933-MONOMER.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
HAMAPMF_00455. Xylose_isom_A.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSPR00688. XYLOSISMRASE.
SUPFAMSSF51658. SSF51658. 1 hit.
TIGRFAMsTIGR02630. xylose_isom_A. 1 hit.
PROSITEPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF8HZ60_WEIKK
AccessionPrimary (citable) accession number: F8HZ60
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: July 9, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)