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F8HZ60

- F8HZ60_WEIKK

UniProt

F8HZ60 - F8HZ60_WEIKK

Protein

Xylose isomerase

Gene

xylA

Organism
Weissella koreensis (strain KACC 15510)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 28 (01 Oct 2014)
      Sequence version 1 (21 Sep 2011)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

    Cofactori

    Binds 2 magnesium ions per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei112 – 1121UniRule annotation
    Active sitei115 – 1151UniRule annotation
    Metal bindingi243 – 2431Magnesium 1UniRule annotation
    Metal bindingi279 – 2791Magnesium 1UniRule annotation
    Metal bindingi279 – 2791Magnesium 2UniRule annotation
    Metal bindingi282 – 2821Magnesium 2UniRule annotation
    Metal bindingi307 – 3071Magnesium 1UniRule annotation
    Metal bindingi318 – 3181Magnesium 2UniRule annotation
    Metal bindingi320 – 3201Magnesium 2UniRule annotation
    Metal bindingi350 – 3501Magnesium 1UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. xylose isomerase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-xylose metabolic process Source: UniProtKB-HAMAP
    2. pentose-phosphate shunt Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciWKOR1045854:GH3T-933-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
    Gene namesi
    Name:xylAUniRule annotation
    Ordered Locus Names:WKK_04485Imported
    OrganismiWeissella koreensis (strain KACC 15510)Imported
    Taxonomic identifieri1045854 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLeuconostocaceaeWeissella
    ProteomesiUP000008930: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotationSAAS annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotation

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotationSAAS annotation

    Structurei

    3D structure databases

    ProteinModelPortaliF8HZ60.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the xylose isomerase family.UniRule annotation

    Phylogenomic databases

    KOiK01805.
    OMAiSTDVEDM.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    HAMAPiMF_00455. Xylose_isom_A.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    PRINTSiPR00688. XYLOSISMRASE.
    SUPFAMiSSF51658. SSF51658. 1 hit.
    TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
    PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F8HZ60-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAELFDFPKV EFIGGKKGLD FEQSKGYNFY NADEEFTING ETKAMKDWLK    50
    FSVAYWHTMD QRLVDPFGEG TAVRPWDENG QDDMSDMEHA KSKVKYMFEF 100
    MDKLGVEYFA FHDRDLAPEG KTLAETNANL DIIVDMIEAE MKRTGKKLLW 150
    NTSSLFTNKR FVSGGATAPF ADVFAYAGAQ IKHSLEIAKR LNSESYVFWG 200
    GREGYDSLLN TDTKRELDHI ADFYKLAIDY AKEIGYTGQF LLEPKPKEPT 250
    THQYDTDVQT TISFLYTYGL QDNFKLNLEG NHAFLAGHTY EHEARFAREA 300
    GLLGSLDANM GDKQTGWDID EFPNDIYEAT LVMYEFIKNG GLPTGGLNFD 350
    AKARRSSFTM EDLFYGHMAG MDVYAAGFRV AYKLVQDNFF ENILKNRYAS 400
    FDSGIGADFE AGKVTFADME KYILNKEDSE ILDTVKSGRI EAIKASLNNY 450
    IYSVLGETFK K 461
    Length:461
    Mass (Da):52,444
    Last modified:September 21, 2011 - v1
    Checksum:i3630CF72A8F39BB1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002899 Genomic DNA. Translation: AEJ23769.1.
    RefSeqiYP_004726448.1. NC_015759.1.

    Genome annotation databases

    EnsemblBacteriaiAEJ23769; AEJ23769; WKK_04485.
    GeneIDi10954208.
    KEGGiwko:WKK_04485.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002899 Genomic DNA. Translation: AEJ23769.1 .
    RefSeqi YP_004726448.1. NC_015759.1.

    3D structure databases

    ProteinModelPortali F8HZ60.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEJ23769 ; AEJ23769 ; WKK_04485 .
    GeneIDi 10954208.
    KEGGi wko:WKK_04485.

    Phylogenomic databases

    KOi K01805.
    OMAi STDVEDM.

    Enzyme and pathway databases

    BioCyci WKOR1045854:GH3T-933-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    HAMAPi MF_00455. Xylose_isom_A.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    PRINTSi PR00688. XYLOSISMRASE.
    SUPFAMi SSF51658. SSF51658. 1 hit.
    TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
    PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Weissella koreensis KACC 15510, isolated from Kimchi."
      Lee S.H., Jung J.Y., Lee S.H., Jeon C.O.
      J. Bacteriol. 193:5534-5534(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: KACC 15510Imported.

    Entry informationi

    Entry nameiF8HZ60_WEIKK
    AccessioniPrimary (citable) accession number: F8HZ60
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 21, 2011
    Last sequence update: September 21, 2011
    Last modified: October 1, 2014
    This is version 28 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3