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F8H3X5

- F8H3X5_PSEUT

UniProt

F8H3X5 - F8H3X5_PSEUT

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

PSTAB_2643

Organism
Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM 5965 / LMG 11199 / NCIMB 11358 / Stanier 221)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPSTU96563:GHIN-2702-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:PSTAB_2643Imported
OrganismiPseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM 5965 / LMG 11199 / NCIMB 11358 / Stanier 221)Imported
Taxonomic identifieri96563 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000008932: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F8H3X5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKAFATLYSR LDATTSSNAK LAAMRDYFRE ADPADAAWAV YFLAGGRPRQ
60 70 80 90 100
LVPTRVLRET AMQAAGLPEW LFEESYQAVG DMAETISLLM PEAEHSSEDG
110 120 130 140 150
LAVWMQDRLL PLRGLPPEEL AERLPALWAQ LDRLSLMVCI KLITGAFRVG
160 170 180 190 200
VSKLLVTRAL ASLADLDPKR VAQRLVGYTD LSHRPSAEGY RALIAEESEH
210 220 230 240 250
EHAQRGGQPY PFFLAHALQA PVDTFDTLLG APDNWFIEWK WDGIRAQLVK
260 270 280 290 300
RDGQIWVWSR GEELVSERFP ELCELARCLP DGTVIDGEIL VWKHAPETLA
310 320 330 340 350
GELFDDASTG EPSADGFGVQ PFALLQQRIG RKNLTAKVLQ DAPVAVLAYD
360 370 380 390 400
LLEWQGDDWR QREHRERRQQ LEAVVGQCPS PQLMLSPLVS GADWQDLARQ
410 420 430 440 450
REASRQLGVE GMMIKARAAQ YGVGRTKDVG VWWKWKIDPY SVDAVLIYAQ
460 470 480 490 500
RGHGRRASLY TDYTFAVWDG EPGDPERKLV PFAKAYSGLT DEEMRKVDAI
510 520 530 540 550
VRKTTVEKFG PVRSVTPTLV FELGFEGIAA SSRHKSGIAV RFPRMLRWRL
560
DKPVDEADTL ETLKELLG
Length:568
Mass (Da):63,751
Last modified:September 21, 2011 - v1
Checksum:iD594D81A32204E4E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002881 Genomic DNA. Translation: AEJ05924.1.
RefSeqiYP_004715013.1. NC_015740.1.

Genome annotation databases

EnsemblBacteriaiAEJ05924; AEJ05924; PSTAB_2643.
GeneIDi10943686.
KEGGipsz:PSTAB_2643.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002881 Genomic DNA. Translation: AEJ05924.1 .
RefSeqi YP_004715013.1. NC_015740.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEJ05924 ; AEJ05924 ; PSTAB_2643 .
GeneIDi 10943686.
KEGGi psz:PSTAB_2643.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci PSTU96563:GHIN-2702-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Complete Genome Sequence of Pseudomonas stutzeri Strain CGMCC 1.1803."
    Yan Y., Chen M., Lu W., Zhang W., Ping S., Lin M.
    Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC 17588.
  2. "Complete genome sequence of Pseudomonas stutzeri strain CGMCC 1.1803."
    Yan Y., Chen M., Lu W., Zhang W., Ping S., Lin M.
    Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 17588 / DSM 5190 / CCUG 11256 / JCM 5965 / LMG 11199 / NCIMB 11358 / Stanier 221Imported.

Entry informationi

Entry nameiF8H3X5_PSEUT
AccessioniPrimary (citable) accession number: F8H3X5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: October 1, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3