SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

F8H3X5

- F8H3X5_PSEUT

UniProt

F8H3X5 - F8H3X5_PSEUT

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name: ATP-dependent DNA ligase
Gene
PSTAB_2643
Organism
Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM 5965 / LMG 11199 / NCIMB 11358 / Stanier 221)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPSTU96563:GHIN-2702-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:PSTAB_2643Imported
OrganismiPseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM 5965 / LMG 11199 / NCIMB 11358 / Stanier 221)Imported
Taxonomic identifieri96563 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000008932: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F8H3X5-1 [UniParc]FASTAAdd to Basket

« Hide

MKAFATLYSR LDATTSSNAK LAAMRDYFRE ADPADAAWAV YFLAGGRPRQ    50
LVPTRVLRET AMQAAGLPEW LFEESYQAVG DMAETISLLM PEAEHSSEDG 100
LAVWMQDRLL PLRGLPPEEL AERLPALWAQ LDRLSLMVCI KLITGAFRVG 150
VSKLLVTRAL ASLADLDPKR VAQRLVGYTD LSHRPSAEGY RALIAEESEH 200
EHAQRGGQPY PFFLAHALQA PVDTFDTLLG APDNWFIEWK WDGIRAQLVK 250
RDGQIWVWSR GEELVSERFP ELCELARCLP DGTVIDGEIL VWKHAPETLA 300
GELFDDASTG EPSADGFGVQ PFALLQQRIG RKNLTAKVLQ DAPVAVLAYD 350
LLEWQGDDWR QREHRERRQQ LEAVVGQCPS PQLMLSPLVS GADWQDLARQ 400
REASRQLGVE GMMIKARAAQ YGVGRTKDVG VWWKWKIDPY SVDAVLIYAQ 450
RGHGRRASLY TDYTFAVWDG EPGDPERKLV PFAKAYSGLT DEEMRKVDAI 500
VRKTTVEKFG PVRSVTPTLV FELGFEGIAA SSRHKSGIAV RFPRMLRWRL 550
DKPVDEADTL ETLKELLG 568
Length:568
Mass (Da):63,751
Last modified:September 21, 2011 - v1
Checksum:iD594D81A32204E4E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002881 Genomic DNA. Translation: AEJ05924.1.
RefSeqiYP_004715013.1. NC_015740.1.

Genome annotation databases

EnsemblBacteriaiAEJ05924; AEJ05924; PSTAB_2643.
GeneIDi10943686.
KEGGipsz:PSTAB_2643.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002881 Genomic DNA. Translation: AEJ05924.1 .
RefSeqi YP_004715013.1. NC_015740.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEJ05924 ; AEJ05924 ; PSTAB_2643 .
GeneIDi 10943686.
KEGGi psz:PSTAB_2643.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci PSTU96563:GHIN-2702-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Complete Genome Sequence of Pseudomonas stutzeri Strain CGMCC 1.1803."
    Yan Y., Chen M., Lu W., Zhang W., Ping S., Lin M.
    Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC 17588.
  2. "Complete genome sequence of Pseudomonas stutzeri strain CGMCC 1.1803."
    Yan Y., Chen M., Lu W., Zhang W., Ping S., Lin M.
    Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 17588 / DSM 5190 / CCUG 11256 / JCM 5965 / LMG 11199 / NCIMB 11358 / Stanier 221.

Entry informationi

Entry nameiF8H3X5_PSEUT
AccessioniPrimary (citable) accession number: F8H3X5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: October 16, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi