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F8H3X5

- F8H3X5_PSEUT

UniProt

F8H3X5 - F8H3X5_PSEUT

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

PSTAB_2643

Organism
Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM 5965 / LMG 11199 / NCIMB 11358 / Stanier 221)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 15 (01 Oct 2014)
      Sequence version 1 (21 Sep 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciPSTU96563:GHIN-2702-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:PSTAB_2643Imported
    OrganismiPseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM 5965 / LMG 11199 / NCIMB 11358 / Stanier 221)Imported
    Taxonomic identifieri96563 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000008932: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F8H3X5-1 [UniParc]FASTAAdd to Basket

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    MKAFATLYSR LDATTSSNAK LAAMRDYFRE ADPADAAWAV YFLAGGRPRQ    50
    LVPTRVLRET AMQAAGLPEW LFEESYQAVG DMAETISLLM PEAEHSSEDG 100
    LAVWMQDRLL PLRGLPPEEL AERLPALWAQ LDRLSLMVCI KLITGAFRVG 150
    VSKLLVTRAL ASLADLDPKR VAQRLVGYTD LSHRPSAEGY RALIAEESEH 200
    EHAQRGGQPY PFFLAHALQA PVDTFDTLLG APDNWFIEWK WDGIRAQLVK 250
    RDGQIWVWSR GEELVSERFP ELCELARCLP DGTVIDGEIL VWKHAPETLA 300
    GELFDDASTG EPSADGFGVQ PFALLQQRIG RKNLTAKVLQ DAPVAVLAYD 350
    LLEWQGDDWR QREHRERRQQ LEAVVGQCPS PQLMLSPLVS GADWQDLARQ 400
    REASRQLGVE GMMIKARAAQ YGVGRTKDVG VWWKWKIDPY SVDAVLIYAQ 450
    RGHGRRASLY TDYTFAVWDG EPGDPERKLV PFAKAYSGLT DEEMRKVDAI 500
    VRKTTVEKFG PVRSVTPTLV FELGFEGIAA SSRHKSGIAV RFPRMLRWRL 550
    DKPVDEADTL ETLKELLG 568
    Length:568
    Mass (Da):63,751
    Last modified:September 21, 2011 - v1
    Checksum:iD594D81A32204E4E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002881 Genomic DNA. Translation: AEJ05924.1.
    RefSeqiYP_004715013.1. NC_015740.1.

    Genome annotation databases

    EnsemblBacteriaiAEJ05924; AEJ05924; PSTAB_2643.
    GeneIDi10943686.
    KEGGipsz:PSTAB_2643.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002881 Genomic DNA. Translation: AEJ05924.1 .
    RefSeqi YP_004715013.1. NC_015740.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEJ05924 ; AEJ05924 ; PSTAB_2643 .
    GeneIDi 10943686.
    KEGGi psz:PSTAB_2643.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci PSTU96563:GHIN-2702-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete Genome Sequence of Pseudomonas stutzeri Strain CGMCC 1.1803."
      Yan Y., Chen M., Lu W., Zhang W., Ping S., Lin M.
      Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: ATCC 17588.
    2. "Complete genome sequence of Pseudomonas stutzeri strain CGMCC 1.1803."
      Yan Y., Chen M., Lu W., Zhang W., Ping S., Lin M.
      Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 17588 / DSM 5190 / CCUG 11256 / JCM 5965 / LMG 11199 / NCIMB 11358 / Stanier 221Imported.

    Entry informationi

    Entry nameiF8H3X5_PSEUT
    AccessioniPrimary (citable) accession number: F8H3X5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 21, 2011
    Last sequence update: September 21, 2011
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3