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F8H3X5 (F8H3X5_PSEUT) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length568 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
F8H3X5 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: D594D81A32204E4E

FASTA56863,751
        10         20         30         40         50         60 
MKAFATLYSR LDATTSSNAK LAAMRDYFRE ADPADAAWAV YFLAGGRPRQ LVPTRVLRET 

        70         80         90        100        110        120 
AMQAAGLPEW LFEESYQAVG DMAETISLLM PEAEHSSEDG LAVWMQDRLL PLRGLPPEEL 

       130        140        150        160        170        180 
AERLPALWAQ LDRLSLMVCI KLITGAFRVG VSKLLVTRAL ASLADLDPKR VAQRLVGYTD 

       190        200        210        220        230        240 
LSHRPSAEGY RALIAEESEH EHAQRGGQPY PFFLAHALQA PVDTFDTLLG APDNWFIEWK 

       250        260        270        280        290        300 
WDGIRAQLVK RDGQIWVWSR GEELVSERFP ELCELARCLP DGTVIDGEIL VWKHAPETLA 

       310        320        330        340        350        360 
GELFDDASTG EPSADGFGVQ PFALLQQRIG RKNLTAKVLQ DAPVAVLAYD LLEWQGDDWR 

       370        380        390        400        410        420 
QREHRERRQQ LEAVVGQCPS PQLMLSPLVS GADWQDLARQ REASRQLGVE GMMIKARAAQ 

       430        440        450        460        470        480 
YGVGRTKDVG VWWKWKIDPY SVDAVLIYAQ RGHGRRASLY TDYTFAVWDG EPGDPERKLV 

       490        500        510        520        530        540 
PFAKAYSGLT DEEMRKVDAI VRKTTVEKFG PVRSVTPTLV FELGFEGIAA SSRHKSGIAV 

       550        560 
RFPRMLRWRL DKPVDEADTL ETLKELLG 

« Hide

References

« Hide 'large scale' references
[1]"Complete Genome Sequence of Pseudomonas stutzeri Strain CGMCC 1.1803."
Yan Y., Chen M., Lu W., Zhang W., Ping S., Lin M.
Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 17588.
[2]"Complete genome sequence of Pseudomonas stutzeri strain CGMCC 1.1803."
Yan Y., Chen M., Lu W., Zhang W., Ping S., Lin M.
Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 17588 / DSM 5190 / CCUG 11256 / JCM 5965 / LMG 11199 / NCIMB 11358 / Stanier 221.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002881 Genomic DNA. Translation: AEJ05924.1.
RefSeqYP_004715013.1. NC_015740.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEJ05924; AEJ05924; PSTAB_2643.
GeneID10943686.
KEGGpsz:PSTAB_2643.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycPSTU96563:GHIN-2702-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF8H3X5_PSEUT
AccessionPrimary (citable) accession number: F8H3X5
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: October 16, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)