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F8GTV0 (F8GTV0_CUPNN) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
ATP-dependent DNA ligase EMBL AEI81266.1
Gene names
Ordered Locus Names:CNE_2c23180 EMBL AEI81266.1
OrganismCupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia eutropha) [Complete proteome] [HAMAP] EMBL AEI81266.1
Taxonomic identifier1042878 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Cupriavidus ›

Protein attributes

Sequence length913 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEI81266.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F8GTV0 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 658C46A0BA20B0E6

FASTA91398,733
        10         20         30         40         50         60 
MAKTTRPTAP QDPGKRRALA KAAGKHTGKR ASTARPAARG APAAKAAPAA LDKYRRMRDF 

        70         80         90        100        110        120 
GATPEPAGGA ARTRGKPRKR AGELSFVIQK HAARRLHYDF RLELGGTLKS WAVPKGPSLD 

       130        140        150        160        170        180 
PADKRMAIHV EDHPLDYAGF EGVIPAGHYG AGTVIVWDRG TWLPVGDAEA GYRAGKLKFE 

       190        200        210        220        230        240 
LRGEKLHGHW TLVRMHGSRQ KEQDAWLLIK ERDETAVPAS EFDVVEALPD SVLGGTQRKP 

       250        260        270        280        290        300 
AAKRAKTAQP PDEAAPDARS TAKSLKPPRG APRAALPLAL APQLATLVEQ PPSDAQAWHY 

       310        320        330        340        350        360 
EIKFDGYRLL ARIAGKDVRL FTRQGHDWTS KLRALARDVG TLGPPDGWLD GEIVVLDKHG 

       370        380        390        400        410        420 
ATDFQALQNA FDTARVEAIQ YFVFDLPYFA GHDLRKVPLV ERRALLRRIF AHNTSPRLQF 

       430        440        450        460        470        480 
SEDFEASPAD MLEAACRMKL EGVIGKRADA SYVSARTNTW IKLKCTLRQE FVVAGFTDPK 

       490        500        510        520        530        540 
GSRAGIGSLL LGVHDSGGRL RYAGNVGTGF DTRTLAALRT QLDALRTDSA PFESVPAGVK 

       550        560        570        580        590        600 
GHWVRPKLVA EVSFGSWTRE GRVRHAVFHG LRTDKPARAV SVERPATPAA KGKPAPKAAK 

       610        620        630        640        650        660 
HTGTQPKAGT AAKRATAAGG KVAISHAGRV IDTASGLTKG DLVRYYERAA PLMLPHLRGR 

       670        680        690        700        710        720 
PIAMVRAPSG VGGEQFFQRH GDTLRVDGLN VLDSGLWPGH PALLEIASAE ALVSAAQLNV 

       730        740        750        760        770        780 
VEFHTWNASK RSLDRPNRIV FDLDPGEGVP WAQMQEAATL MKALLDELGL ASFLKTSGGK 

       790        800        810        820        830        840 
GLHVVVPITP RAGWDEVKAF AHDVVRHVAK TIPQRFVAKS GPRNRVGKIF IDYLRNGVGA 

       850        860        870        880        890        900 
TTAAAFSARA RPGLGVSMPV WWEELDTLQG AAQWTVANAG PRLDALAADD PWADYADTRQ 

       910 
AITRAAARLA RTG

« Hide

References

[1]"Complete Genome Sequence of the Type Strain Cupriavidus necator N-1."
Poehlein A., Kusian B., Friedrich B., Daniel R., Bowien B.
J. Bacteriol. 193:5017-5017(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 43291 / DSM 13513 / N-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002878 Genomic DNA. Translation: AEI81266.1.
RefSeqYP_004682498.1. NC_015723.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEI81266; AEI81266; CNE_2c23180.
GeneID10922789.
KEGGcnc:CNE_2c23180.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycCNEC1042878:GH0Z-5999-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF8GTV0_CUPNN
AccessionPrimary (citable) accession number: F8GTV0
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: May 29, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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