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Protein
Submitted name:

DNA ligase Lig

Gene

lig2

Organism
Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia eutropha)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCNEC1042878:GH0Z-5538-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase LigImported (EC:6.5.1.1Imported)
Gene namesi
Name:lig2Imported
Ordered Locus Names:CNE_2c18520Imported
OrganismiCupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia eutropha)Imported
Taxonomic identifieri1042878 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus
ProteomesiUP000006798 Componenti: Chromosome 2

Family & Domainsi

Phylogenomic databases

KOiK10747.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F8GR63-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKAFADLYAA LDGTTSTKAR LAALIDYLRV APPEDAAWAV YFLAGGKPRQ
60 70 80 90 100
IVPVSLLREL ARQAAELPDW LFEESYQAVG DLAETIALLL PEPMDADHAG
110 120 130 140 150
LAEWVEQRLL PLRGLPPEAL MPRLDALWRP LDAHGRLVLF KLITGAFRVG
160 170 180 190 200
VSRLLVTRAL GEVAGIDPKR VAERMVGYTD LSARPDAAHF LALIAPEGDD
210 220 230 240 250
HRELRGGGQP YPFFLAHPLQ APLEEFDSVL GTTENWLVEW KWDGIRAQLV
260 270 280 290 300
RRGGQAWLWS RGEELITERF PEILEAAGQL PDGTVLDGEI VVWQQGRVQP
310 320 330 340 350
FALLQQRIGR KTLSAKLLRE APAILMAYDL LEWHGADWRT RPEAERRARL
360 370 380 390 400
EQVVADYVHP SLELSPLVEA ESWEHFARLR DASRELGVEG FMLKAASAAY
410 420 430 440 450
GAGRTKDVGI WWKWKIDPYS VDAVLVYAQR GHGRRASLYT DFTFAVWNAP
460 470 480 490 500
PGTPGRALVP FAKAYSGLTD EEMRAVDAIV RRTTVEKFGP VRSVEPTQVF
510 520 530 540 550
ELGFEGIARS GRHKSGIAVR FPRMLRWRTD KPIEEADTLA TLEAMLPGAA

APREDAA
Length:557
Mass (Da):62,044
Last modified:September 21, 2011 - v1
Checksum:i7EBF286580F0296A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002878 Genomic DNA. Translation: AEI80808.1.
RefSeqiWP_013953493.1. NC_015723.1.

Genome annotation databases

EnsemblBacteriaiAEI80808; AEI80808; CNE_2c18520.
KEGGicnc:CNE_2c18520.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002878 Genomic DNA. Translation: AEI80808.1.
RefSeqiWP_013953493.1. NC_015723.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEI80808; AEI80808; CNE_2c18520.
KEGGicnc:CNE_2c18520.

Phylogenomic databases

KOiK10747.

Enzyme and pathway databases

BioCyciCNEC1042878:GH0Z-5538-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the type strain Cupriavidus necator N-1."
    Poehlein A., Kusian B., Friedrich B., Daniel R., Bowien B.
    J. Bacteriol. 193:5017-5017(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43291 / DSM 13513 / N-1Imported.

Entry informationi

Entry nameiF8GR63_CUPNN
AccessioniPrimary (citable) accession number: F8GR63
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: July 22, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.