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F8GBJ7 (F8GBJ7_FRAST) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=1.1.1.42 EMBL AEI35764.1
Gene names
Ordered Locus Names:F7308_0837 EMBL AEI35764.1
OrganismFrancisella sp. (strain TX077308) [Complete proteome] [HAMAP] EMBL AEI35764.1
Taxonomic identifier573569 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaThiotrichalesFrancisellaceaeFrancisella

Protein attributes

Sequence length738 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Cofactor

Binds 1 magnesium or manganese ion per subunit By similarity. PIRSR PIRSR009407-3

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region130 – 1378Substrate binding By similarity PIRSR PIRSR009407-2

Sites

Metal binding3481Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5461Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5501Magnesium or manganese By similarity PIRSR PIRSR009407-3
Binding site1431Substrate By similarity PIRSR PIRSR009407-2
Binding site5451Substrate By similarity PIRSR PIRSR009407-2
Site2531Critical for catalysis By similarity PIRSR PIRSR009407-1
Site4181Critical for catalysis By similarity PIRSR PIRSR009407-1

Sequences

Sequence LengthMass (Da)Tools
F8GBJ7 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 7A47B71419334175

FASTA73882,068
        10         20         30         40         50         60 
MHKIFYTFTD EAPALATGSF LPIVESFTKV ADIELETKDI SLAARILANF NDCLTDEQKC 

        70         80         90        100        110        120 
SDNLAILGEL AKTPDANIIK LPNISASIPQ LTAAIKELQS KGYKIPDYPF EPKDDEEQEI 

       130        140        150        160        170        180 
KARYAKVLGS AVNPVLREGN SDRRVADAVK KYAEKHPHSM GAWTKDSKSH VASMADNDFY 

       190        200        210        220        230        240 
ANEKSYIVPK ATKVKIVHTD TKGTQTVLKD NLALEEKEII DATKISIKAL REFYKTEIAK 

       250        260        270        280        290        300 
AKKEGTLLSL HLKATMMKVS DPILFGHAVE IFFEDVFKKY AKEFKELGVN PRNGWGDAVE 

       310        320        330        340        350        360 
KIKQLPQDLQ DKINTDIEKV FAKQPDIAMV NSDKGITNLN VPSDVIIDAS MPAAIRSSGQ 

       370        380        390        400        410        420 
MWNKDGKLQD MKAMIPDRCY AGVYAATIDF CKENGAFDVA TMGDVSNVGL MAKKAEEYGS 

       430        440        450        460        470        480 
HDKTFEIQAD GKVEVIDIEG NVILEHQVEK GDIWRACQTK DIAVKDWVKL AINRARITQN 

       490        500        510        520        530        540 
PAIFWLDSKR AHDRNLIAKV NEYKVLHDTT GLDIQILAPI EATKYSLKRM KEGKNTISVT 

       550        560        570        580        590        600 
GNVLRDYLTD LFPILELGTS AKMLSIVPLL AGGGLFETGA GGSAPKHVEQ LIEENHLRWD 

       610        620        630        640        650        660 
SLGEFLALGA SLEDLAIKTR DPKIKVLAEA LSQANQDFLD NDKSPKRKVG ELDTRGSHFY 

       670        680        690        700        710        720 
LAYYWVKALA EQTGNAEIKA RFEPIYAELK TNEDKIVKEL NDAQGKKVDV GGYYFMDSDK 

       730 
LAKVMRPSKT LNSILAKL 

« Hide

References

[1]"The complete genome of Francisella sp. TX077308."
Kuske C.R., Challacombe J.F., Siddaramappa S., Petersen J.M.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TX077308.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002872 Genomic DNA. Translation: AEI35764.1.
RefSeqYP_004647364.1. NC_015696.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEI35764; AEI35764; F7308_0837.
GeneID10861842.
KEGGfrt:F7308_0837.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00031.

Enzyme and pathway databases

BioCycFSP573569:GHZ6-857-MONOMER.

Family and domain databases

Gene3D3.40.718.10. 3 hits.
InterProIPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PfamPF03971. IDH. 1 hit.
[Graphical view]
PIRSFPIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsTIGR00178. monomer_idh. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF8GBJ7_FRAST
AccessionPrimary (citable) accession number: F8GBJ7
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: July 9, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)