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F8G205 (F8G205_PSEPU) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:PPS_4150 EMBL AEJ14689.1
OrganismPseudomonas putida S16 [Complete proteome] EMBL AEJ14689.1
Taxonomic identifier1042876 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length552 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEJ14689.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F8G205 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 28B08D0529AFADF5

FASTA55261,903
        10         20         30         40         50         60 
MKAFAELYLR LDATTSSTAK LTALREYFST APAGDAAWAV YFLAGGRPRQ LVPTRVLREL 

        70         80         90        100        110        120 
AGRLAGLPDW LFEECYQAVG DLAETISLLV PESHHPGGDG LARWVEAHLL PLRGLPVEEI 

       130        140        150        160        170        180 
QQRLPPLWAQ LDRPSLMLCL KLITGSFRVG VSKLLVTRAL AQLAGLDAKR VAQRLVGYTD 

       190        200        210        220        230        240 
ISHRPTAASY QRLIAPESDD EHSLRGGQPY PFFLAHPLQV STEQLDTLLG PPSEWQIEWK 

       250        260        270        280        290        300 
WDGIRNQVVK REGQLWVWSR GEELVTERFP ELHSLAQTLP DGVVLDGEIL VWKPGGSAAE 

       310        320        330        340        350        360 
LAVQPFALLQ QRLGRKTLGK KLLSDAPVVL QAYDLLEWQG EDWRSRPQHA RRQQLEQVLE 

       370        380        390        400        410        420 
QHPLAPVLLS PLLEGQDWTD LARQREQSRS LGVEGLMLKQ REALYGVGRT KDMGTWWKWK 

       430        440        450        460        470        480 
IDPFSVDAVL IYAQRGHGRR ASLYSDYTFA VWDAPAGTPG RALVPFAKAY SGLSDEEMRK 

       490        500        510        520        530        540 
VDAIIRKTTV ETFGPVRSVT PTLVFELGFE GIALSRRHKS GIAVRFPRML RWRLDKPVEE 

       550 
ADDLATLQAL LA 

« Hide

References

[1]"Complete Genome Sequence of the Nicotine-Degrading Pseudomonas putida Strain S16."
Yu H., Tang H., Wang L., Yao Y., Wu G., Xu P.
J. Bacteriol. 193:5541-5542(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: S16 EMBL AEJ14689.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002870 Genomic DNA. Translation: AEJ14689.1.
RefSeqYP_004703569.1. NC_015733.1.

3D structure databases

ProteinModelPortalF8G205.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEJ14689; AEJ14689; PPS_4150.
GeneID10939772.
KEGGppt:PPS_4150.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycPPUT1042876:GH0R-4100-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF8G205_PSEPU
AccessionPrimary (citable) accession number: F8G205
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: April 16, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)