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F8G205

- F8G205_PSEP6

UniProt

F8G205 - F8G205_PSEP6

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

PPS_4150

Organism
Pseudomonas putida (strain S16)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (21 Sep 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciPPUT1042876:GH0R-4100-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    ORF Names:PPS_4150Imported
    OrganismiPseudomonas putida (strain S16)Imported
    Taxonomic identifieri1042876 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000000502: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliF8G205.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F8G205-1 [UniParc]FASTAAdd to Basket

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    MKAFAELYLR LDATTSSTAK LTALREYFST APAGDAAWAV YFLAGGRPRQ    50
    LVPTRVLREL AGRLAGLPDW LFEECYQAVG DLAETISLLV PESHHPGGDG 100
    LARWVEAHLL PLRGLPVEEI QQRLPPLWAQ LDRPSLMLCL KLITGSFRVG 150
    VSKLLVTRAL AQLAGLDAKR VAQRLVGYTD ISHRPTAASY QRLIAPESDD 200
    EHSLRGGQPY PFFLAHPLQV STEQLDTLLG PPSEWQIEWK WDGIRNQVVK 250
    REGQLWVWSR GEELVTERFP ELHSLAQTLP DGVVLDGEIL VWKPGGSAAE 300
    LAVQPFALLQ QRLGRKTLGK KLLSDAPVVL QAYDLLEWQG EDWRSRPQHA 350
    RRQQLEQVLE QHPLAPVLLS PLLEGQDWTD LARQREQSRS LGVEGLMLKQ 400
    REALYGVGRT KDMGTWWKWK IDPFSVDAVL IYAQRGHGRR ASLYSDYTFA 450
    VWDAPAGTPG RALVPFAKAY SGLSDEEMRK VDAIIRKTTV ETFGPVRSVT 500
    PTLVFELGFE GIALSRRHKS GIAVRFPRML RWRLDKPVEE ADDLATLQAL 550
    LA 552
    Length:552
    Mass (Da):61,903
    Last modified:September 21, 2011 - v1
    Checksum:i28B08D0529AFADF5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002870 Genomic DNA. Translation: AEJ14689.1.
    RefSeqiWP_013973943.1. NC_015733.1.
    YP_004703569.1. NC_015733.1.

    Genome annotation databases

    EnsemblBacteriaiAEJ14689; AEJ14689; PPS_4150.
    GeneIDi10939772.
    KEGGippt:PPS_4150.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002870 Genomic DNA. Translation: AEJ14689.1 .
    RefSeqi WP_013973943.1. NC_015733.1.
    YP_004703569.1. NC_015733.1.

    3D structure databases

    ProteinModelPortali F8G205.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEJ14689 ; AEJ14689 ; PPS_4150 .
    GeneIDi 10939772.
    KEGGi ppt:PPS_4150.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci PPUT1042876:GH0R-4100-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the nicotine-degrading Pseudomonas putida strain S16."
      Yu H., Tang H., Wang L., Yao Y., Wu G., Xu P.
      J. Bacteriol. 193:5541-5542(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: S16Imported.

    Entry informationi

    Entry nameiF8G205_PSEP6
    AccessioniPrimary (citable) accession number: F8G205
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 21, 2011
    Last sequence update: September 21, 2011
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3