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F8FU69 (F8FU69_PSEPU) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Methionyl-tRNA formyltransferase HAMAP-Rule MF_00182
EC=2.1.2.9 HAMAP-Rule MF_00182
Gene names
Name:fmt HAMAP-Rule MF_00182
ORF Names:PPS_0030 EMBL AEJ10619.1
OrganismPseudomonas putida S16 EMBL AEJ10619.1
Taxonomic identifier1042876 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas ›

Protein attributes

Sequence length310 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by: (I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-GTP By similarity. HAMAP-Rule MF_00182 SAAS SAAS005794

Catalytic activity

10-formyltetrahydrofolate + L-methionyl-tRNA(fMet) = tetrahydrofolate + N-formylmethionyl-tRNA(fMet). HAMAP-Rule MF_00182 SAAS SAAS005794

Sequence similarities

Belongs to the fmt family. HAMAP-Rule MF_00182

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region109 – 1124Tetrahydrofolate (THF) binding By similarity HAMAP-Rule MF_00182

Sequences

Sequence LengthMass (Da)Tools
F8FU69 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: B7242087AE8C26EA

FASTA31032,926
        10         20         30         40         50         60 
MRIVFAGTPE FAAEHLKALL DSPYEIVAVY TQPDRPAGRG QKLMPSPVKQ LAVAHDIPVF 

        70         80         90        100        110        120 
QPPTLRNAEA QAELAALKPD LMVVVAYGLI LPQVVLDIPR LGCINSHASL LPRWRGAAPI 

       130        140        150        160        170        180 
QRAVEAGDAE SGVTVMRMEA GLDTGPMLLK VVTPISAEDT GGSLHDRLAE MGPPAVVQAI 

       190        200        210        220        230        240 
AGLADGSLQG EVQDDALATY AHKLNKDEAR IDWSRPAVEL ERLIRAFNPW PVCHSTLDGE 

       250        260        270        280        290        300 
SVKVLAANLS TATGTPGEIL SASKDGLVVA CGDQALSLTR LQLPGGKALN FSDLFNSRRE 

       310 
KFASGKVLGQ

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References

[1]"Complete Genome Sequence of the Nicotine-Degrading Pseudomonas putida Strain S16."
Yu H., Tang H., Wang L., Yao Y., Wu G., Xu P.
J. Bacteriol. 193:5541-5542(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: S16 EMBL AEJ10619.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002870 Genomic DNA. Translation: AEJ10619.1.
RefSeqYP_004699499.1. NC_015733.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEJ10619; AEJ10619; PPS_0030.
GeneID10935702.
KEGGppt:PPS_0030.

Phylogenomic databases

KOK00604.

Enzyme and pathway databases

BioCycPPUT1042876:GH0R-30-MONOMER.

Family and domain databases

Gene3D3.10.25.10. 1 hit.
3.40.50.170. 1 hit.
HAMAPMF_00182. Formyl_trans.
InterProIPR005794. Fmt.
IPR005793. Formyl_trans_C.
IPR002376. Formyl_transf_N.
IPR011034. Formyl_transferase_C-like.
IPR001555. GART_AS.
IPR015518. Met_tRNA_Form_TA-like.
[Graphical view]
PANTHERPTHR11138. PTHR11138. 1 hit.
PfamPF02911. Formyl_trans_C. 1 hit.
PF00551. Formyl_trans_N. 1 hit.
[Graphical view]
SUPFAMSSF50486. FMT_C_like. 1 hit.
SSF53328. formyl_transf. 1 hit.
TIGRFAMsTIGR00460. fmt. 1 hit.
PROSITEPS00373. GART. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF8FU69_PSEPU
AccessionPrimary (citable) accession number: F8FU69
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: April 3, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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