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F8FRU4 (F8FRU4_PAEMK) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
ATP dependent DNA ligase EMBL AEI40651.1
Gene names
Ordered Locus Names:KNP414_02090 EMBL AEI40651.1
OrganismPaenibacillus mucilaginosus (strain KNP414) [Complete proteome] [HAMAP]
Taxonomic identifier1036673 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Paenibacillaceae › Paenibacillus ›

Protein attributes

Sequence length284 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEI40651.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F8FRU4 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: C43094E793F1105C

FASTA28432,230
        10         20         30         40         50         60 
MFISPMLLET AKHPFSNEHY LFEPKIDGHR LVLSRQGGQT RLYTRHHNDC TFQYPELNPV 

        70         80         90        100        110        120 
ALDDVILDGE VAATDASGAI DFEAVMERFA LRRADKVRRA AAERPVNYIV FDVLRYNGVD 

       130        140        150        160        170        180 
LRGLPLYRRK EILAGIDFGN PHMAKVPVVP KEGERLFEQI AARQLEGIVA KRMDSVYVGH 

       190        200        210        220        230        240 
RSEAWLKIIN WQYAEVYLTG YKKEGFGWLA ASAGPGGILK PAGLIELGIT PKHRTAFNGV 

       250        260        270        280 
RDQLQTGEDG EFVYLEPKLK AKVKMRNWTR AGLLRSPVFM EFCR

« Hide

References

[1]"Complete genome sequence of Paenibacillus mucilaginosus KNP414."
Wang J., Hu S., Hu X., Zhang B., Dong D., Zhang S., Zhao K., Wu D.
Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KNP414 EMBL AEI40651.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002869 Genomic DNA. Translation: AEI40651.1.
RefSeqYP_004640521.1. NC_015690.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEI40651; AEI40651; KNP414_02090.
GeneID10854969.
KEGGpms:KNP414_02090.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycPMUC1036673:GJD1-2090-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF8FRU4_PAEMK
AccessionPrimary (citable) accession number: F8FRU4
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: April 3, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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