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Protein

30S ribosomal protein S5

Gene

rpsE

Organism
Paenibacillus mucilaginosus (strain KNP414)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body.UniRule annotationSAAS annotation
With S4 and S12 plays an important role in translational accuracy.UniRule annotationSAAS annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationSAAS annotation, RNA-binding, rRNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S5UniRule annotationSAAS annotation
Gene namesi
Name:rpsEUniRule annotationImported
Ordered Locus Names:KNP414_07508Imported
OrganismiPaenibacillus mucilaginosus (strain KNP414)Imported
Taxonomic identifieri1036673 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
Proteomesi
  • UP000006620 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts proteins S4 and S8.UniRule annotationSAAS annotation

Protein-protein interaction databases

STRINGi1036673.KNP414_07508

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini10 – 73S5 DRBMInterPro annotationAdd BLAST64

Domaini

The N-terminal domain interacts with the head of the 30S subunit; the C-terminal domain interacts with the body and contacts protein S4. The interaction surface between S4 and S5 is involved in control of translational fidelity.UniRule annotation

Sequence similaritiesi

Belongs to the universal ribosomal protein uS5 family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4108RA9 Bacteria
COG0098 LUCA
KOiK02988
OMAiKRGCGSW

Family and domain databases

Gene3Di3.30.230.10, 1 hit
HAMAPiMF_01307_B Ribosomal_S5_B, 1 hit
InterProiView protein in InterPro
IPR000851 Ribosomal_S5
IPR005712 Ribosomal_S5_bac-type
IPR005324 Ribosomal_S5_C
IPR020568 Ribosomal_S5_D2-typ_fold
IPR014721 Ribosomal_S5_D2-typ_fold_subgr
IPR013810 Ribosomal_S5_N
IPR018192 Ribosomal_S5_N_CS
PANTHERiPTHR13718 PTHR13718, 1 hit
PfamiView protein in Pfam
PF00333 Ribosomal_S5, 1 hit
PF03719 Ribosomal_S5_C, 1 hit
SUPFAMiSSF54211 SSF54211, 1 hit
TIGRFAMsiTIGR01021 rpsE_bact, 1 hit
PROSITEiView protein in PROSITE
PS00585 RIBOSOMAL_S5, 1 hit
PS50881 S5_DSRBD, 1 hit

Sequencei

Sequence statusi: Complete.

F8FA29-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRIDPNTLEL SEKVVQINRV AKVVKGGRRF SFSALVVVGD GNGWVGAGIG
60 70 80 90 100
KASEVPDAIR KGIEDAKKNL IHVPIVGTTI PHLVTGKFGA GQVLLKPASK
110 120 130 140 150
GTGVIAGGPV RAVLELAGVG DILTKSLGSS NSMNMVNATL EGLQRLKRAE
160
DVAKLRGKTV EELLG
Length:165
Mass (Da):17,169
Last modified:September 21, 2011 - v1
Checksum:i42551CFA1470854A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002869 Genomic DNA Translation: AEI46002.1
RefSeqiWP_013921144.1, NC_015690.1

Genome annotation databases

EnsemblBacteriaiAEI46002; AEI46002; KNP414_07508
KEGGipms:KNP414_07508
PATRICifig|1036673.3.peg.7003

Similar proteinsi

Entry informationi

Entry nameiF8FA29_PAEMK
AccessioniPrimary (citable) accession number: F8FA29
Entry historyiIntegrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: May 23, 2018
This is version 47 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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