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F8EQN6 (F8EQN6_RUNSL) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length452 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
F8EQN6 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: AD3C13C4B74E616E

FASTA45250,841
        10         20         30         40         50         60 
MTPENLISED QGDINSSEQR RLYTQSLDKE TLHWLEEDAN YFFHQALSTP VMNVLSKTEG 

        70         80         90        100        110        120 
AYIFDLNGKK YLDMHGNGVH NAGFNNPKVV EAMMRQMTEA LAFTPRRYTN IPAVQLAKKL 

       130        140        150        160        170        180 
TEITPAGLDR VLFCPGGSEA IEMAVMLAKQ ITGKWKTISF WDAYHGTGFQ AGAVSGQAHF 

       190        200        210        220        230        240 
LKGNGPMVPG ALHAEFPNYY RNPWKWDDTD AIDEEYLRQI KLIIRNEPDI AAIVAEPISS 

       250        260        270        280        290        300 
TPVVPSQNYW QEVRHLCDRE GIFLIFDEII EGFGRTGKMF ASEHYVTPDV LVLGKSLGGG 

       310        320        330        340        350        360 
MLPFAGIVSK SQYNVLQDSS IGHFTHEKNP LCCAAGLAEI EYIEEHKLVE NAAVQGEYLM 

       370        380        390        400        410        420 
NAFRDMQNKY PLIGNVAGKG FHIGIDLVKD KKTKERAYEE AERIMYRCME RGLAFKIIEG 

       430        440        450 
NVITLRPSLI LTQDQCDFII ETIGDALREE TK 

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References

[1]"The complete genome of chromosome of Runella slithyformis DSM 19594."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Han J., Lapidus A., Bruce D., Goodwin L., Pitluck S., Peters L., Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G., Zhang X., Misra M., Detter J.C., Tapia R., Han C., Land M., Hauser L. expand/collapse author list , Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B., Faehrich R., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002859 Genomic DNA. Translation: AEI51786.1.
RefSeqYP_004658918.1. NC_015703.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEI51786; AEI51786; Runsl_5496.
GeneID10874053.
KEGGrsi:Runsl_5496.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00823.

Enzyme and pathway databases

BioCycRSLI761193:GHKZ-5545-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF8EQN6_RUNSL
AccessionPrimary (citable) accession number: F8EQN6
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: April 16, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)