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F8EJU9 (F8EJU9_RUNSL) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length195 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. SAAS SAAS020634 HAMAP-Rule MF_00124

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00124 SAAS SAAS020633

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00124 SAAS SAAS020633.

Sequence similarities

Belongs to the thymidine kinase family. RuleBase RU004165 HAMAP-Rule MF_00124

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding24 – 318ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding96 – 994ATP By similarity HAMAP-Rule MF_00124

Sites

Active site971Proton acceptor By similarity HAMAP-Rule MF_00124
Metal binding1531Zinc By similarity HAMAP-Rule MF_00124
Metal binding1561Zinc By similarity HAMAP-Rule MF_00124
Metal binding1851Zinc By similarity HAMAP-Rule MF_00124
Metal binding1881Zinc By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
F8EJU9 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 25F9E682AAA9196B

FASTA19521,742
        10         20         30         40         50         60 
MFIEPNHNSK NSQPRIGWVE VVCGSMFSGK TEELIRRLNR AKIARQKVEI FKPAIDKRYH 

        70         80         90        100        110        120 
DVDIVSHNEN SIRSTPVNTS EEILLFAGDC DVVGIDEAQF LDNNLVEVCN KLAGSGKRVI 

       130        140        150        160        170        180 
VAGLDMDFAG KPFGPMPLLL SIAEYVTKVH AVCVVCGEVA QYSYRKVTSQ DKILLGETDS 

       190 
YEARCRRCYT LGELA 

« Hide

References

[1]"The complete genome of chromosome of Runella slithyformis DSM 19594."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Han J., Lapidus A., Bruce D., Goodwin L., Pitluck S., Peters L., Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G., Zhang X., Misra M., Detter J.C., Tapia R., Han C., Land M., Hauser L. expand/collapse author list , Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B., Faehrich R., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002859 Genomic DNA. Translation: AEI47340.1.
RefSeqYP_004654472.1. NC_015703.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEI47340; AEI47340; Runsl_0903.
GeneID10869420.
KEGGrsi:Runsl_0903.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00857.

Enzyme and pathway databases

BioCycRSLI761193:GHKZ-911-MONOMER.

Family and domain databases

HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020633. Thymidine_kinase_CS.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00603. TK_CELLULAR_TYPE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF8EJU9_RUNSL
AccessionPrimary (citable) accession number: F8EJU9
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: April 16, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)