F8EHH5 (F8EHH5_RUNSL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Polyprenyl synthetase EMBL AEI49288.1

Gene names

Ordered Locus Names:

Runsl_2900 EMBL AEI49288.1

Organism

Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) [Complete proteome] [HAMAP]

Taxonomic identifier

761193 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Cytophagia › Cytophagales › Cytophagaceae › Runella › Runella slithyformis

Protein attributes

Sequence length	325 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the FPP/GGPP synthase family. RuleBase RU004466

Ontologies

Keywords
Biological process	Isoprene biosynthesis RuleBase RU004466
Molecular function	Transferase RuleBase RU004466
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	isoprenoid biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	transferase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F8EHH5 [UniParc]. Last modified September 21, 2011. Version 1. Checksum: 3EFDCE994A9AB2E7	FASTA	325	36,166
	10 20 30 40 50 60 MTFQPYLEAI STQIQHTAYG EEPTELYEPI RYIMSLGGKR LRPLLTVLSA NLFIDDWQKA 70 80 90 100 110 120 LKPAIAVEVF HNFTLMHDDI MDCAPLRRGK PTVHEKWNAN TAILSGDVML VNAYELLLDV 130 140 150 160 170 180 APAQLPRVIK RFNRTAAEVC EGQQLDMNFE TRTDVSQEEY IGMIRLKTSV LLGFAMELGG 190 200 210 220 230 240 IIAGADEATT QLLYDAGVNM GLGFQLKDDL LDVYGDPEKF GKQVGGDIIA NKKTFMLIEA 250 260 270 280 290 300 LLLAEGKTKE ALNYWLSLEQ GSYDTAAKVA AVTDIYTQLG LDKIAQTLAD AYFAKGFEAL 310 320 ENLPIAPERK RPIMEFAAFL VGRES

References

[1]

"The complete genome of chromosome of Runella slithyformis DSM 19594." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Han J., Lapidus A., Bruce D., Goodwin L., Pitluck S., Peters L., Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G., Zhang X., Misra M., Detter J.C., Tapia R., Han C., Land M., Hauser L. , Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B., Faehrich R., Brambilla E., Klenk H.-P., Eisen J.A. Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002859 Genomic DNA. Translation: AEI49288.1.
RefSeq	YP_004656420.1. NC_015703.1.
3D structure databases
ProteinModelPortal	F8EHH5.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEI49288; AEI49288; Runsl_2900.
GeneID	10871431.
KEGG	rsi:Runsl_2900.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K13789.
Enzyme and pathway databases
BioCyc	RSLI761193:GHKZ-3059-MONOMER.
Family and domain databases
Gene3D	1.10.600.10. 1 hit.
InterPro	IPR000092. Polyprenyl_synt. IPR017446. Polyprenyl_synth-rel. IPR008949. Terpenoid_synth. [Graphical view]
PANTHER	PTHR12001. PTHR12001. 1 hit.
Pfam	PF00348. polyprenyl_synt. 1 hit. [Graphical view]
SUPFAM	SSF48576. Terpenoid_synth. 1 hit.
PROSITE	PS00723. POLYPRENYL_SYNTHASE_1. 1 hit. PS00444. POLYPRENYL_SYNTHASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F8EHH5_RUNSL

Accession

Primary (citable) accession number: F8EHH5

Entry history

Integrated into UniProtKB/TrEMBL:	September 21, 2011
Last sequence update:	September 21, 2011
Last modified:	April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)