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F8EBW9

- F8EBW9_RUNSL

UniProt

F8EBW9 - F8EBW9_RUNSL

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Protein
Submitted name:

Glycosyl hydrolase

Gene

Runsl_0157

Organism
Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. exo-alpha-sialidase activity Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciRSLI761193:GHKZ-157-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycosyl hydrolaseImported
Gene namesi
Ordered Locus Names:Runsl_0157Imported
OrganismiRunella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4)Imported
Taxonomic identifieri761193 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeRunella
ProteomesiUP000000493: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01186.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
SUPFAMiSSF50939. SSF50939. 1 hit.

Sequencei

Sequence statusi: Complete.

F8EBW9-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MSKGHKEGGT TLVLFGKIVS GLPPLAVLFI HYVLLNKKVI VSLSTVQLPA
60 70 80 90 100
KMHLRLFLLL LIPTLTIAQT SADLHSPKET VVFQNGQNGY KCYRIPAIVK
110 120 130 140 150
APNGDLLAFA EARRNNCGDF GDVEIVMKRS TDNGASWGKL QVVADNSNDQ
160 170 180 190 200
AGNPAPVFDL TDKRFSKGRL FLFYNTGIAH EQEVREGKAI REVWYKTCTD
210 220 230 240 250
NGQTWSAPVN ITTQVSKPNK PDVNPAYTFK EDWRSYANTP GHGLQLQKGK
260 270 280 290 300
YRGRIFIAAN HSAGPPQKQS RDYVAHAFYS DDHGKTFKLS PNVAYAGSNE
310 320 330 340 350
AIAAETSDGS LLFNCRNQSG DAKYRIQAFT KNAGETWDEV KVMTDLPDPI
360 370 380 390 400
CQGSIIDFQP KKGKKVLIFS NNNSQTQRDK LTVRVSYDNG RSWSAGKEIY
410 420 430 440
GAAKSYEDPS AYSDLVVQQD NSLGVLYEKN DYTQIVYAQF SYDWLVQ
Length:447
Mass (Da):49,688
Last modified:September 21, 2011 - v1
Checksum:i87D5C2FEDE21E46C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002859 Genomic DNA. Translation: AEI46614.1.
RefSeqiYP_004653746.1. NC_015703.1.

Genome annotation databases

EnsemblBacteriaiAEI46614; AEI46614; Runsl_0157.
GeneIDi10868666.
KEGGirsi:Runsl_0157.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002859 Genomic DNA. Translation: AEI46614.1 .
RefSeqi YP_004653746.1. NC_015703.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEI46614 ; AEI46614 ; Runsl_0157 .
GeneIDi 10868666.
KEGGi rsi:Runsl_0157.

Phylogenomic databases

KOi K01186.

Enzyme and pathway databases

BioCyci RSLI761193:GHKZ-157-MONOMER.

Family and domain databases

Gene3Di 2.120.10.10. 1 hit.
InterProi IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view ]
PANTHERi PTHR10628. PTHR10628. 1 hit.
SUPFAMi SSF50939. SSF50939. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4Imported.

Entry informationi

Entry nameiF8EBW9_RUNSL
AccessioniPrimary (citable) accession number: F8EBW9
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: January 7, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.