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F8EBW9 (F8EBW9_RUNSL) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length447 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL AEI46614.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processmetabolic process

Inferred from electronic annotation. Source: GOC

   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F8EBW9 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 87D5C2FEDE21E46C

FASTA44749,688
        10         20         30         40         50         60 
MSKGHKEGGT TLVLFGKIVS GLPPLAVLFI HYVLLNKKVI VSLSTVQLPA KMHLRLFLLL 

        70         80         90        100        110        120 
LIPTLTIAQT SADLHSPKET VVFQNGQNGY KCYRIPAIVK APNGDLLAFA EARRNNCGDF 

       130        140        150        160        170        180 
GDVEIVMKRS TDNGASWGKL QVVADNSNDQ AGNPAPVFDL TDKRFSKGRL FLFYNTGIAH 

       190        200        210        220        230        240 
EQEVREGKAI REVWYKTCTD NGQTWSAPVN ITTQVSKPNK PDVNPAYTFK EDWRSYANTP 

       250        260        270        280        290        300 
GHGLQLQKGK YRGRIFIAAN HSAGPPQKQS RDYVAHAFYS DDHGKTFKLS PNVAYAGSNE 

       310        320        330        340        350        360 
AIAAETSDGS LLFNCRNQSG DAKYRIQAFT KNAGETWDEV KVMTDLPDPI CQGSIIDFQP 

       370        380        390        400        410        420 
KKGKKVLIFS NNNSQTQRDK LTVRVSYDNG RSWSAGKEIY GAAKSYEDPS AYSDLVVQQD 

       430        440 
NSLGVLYEKN DYTQIVYAQF SYDWLVQ 

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References

[1]"The complete genome of chromosome of Runella slithyformis DSM 19594."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Han J., Lapidus A., Bruce D., Goodwin L., Pitluck S., Peters L., Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G., Zhang X., Misra M., Detter J.C., Tapia R., Han C., Land M., Hauser L. expand/collapse author list , Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B., Faehrich R., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002859 Genomic DNA. Translation: AEI46614.1.
RefSeqYP_004653746.1. NC_015703.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEI46614; AEI46614; Runsl_0157.
GeneID10868666.
KEGGrsi:Runsl_0157.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01186.

Enzyme and pathway databases

BioCycRSLI761193:GHKZ-157-MONOMER.

Family and domain databases

Gene3D2.120.10.10. 1 hit.
InterProIPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
SUPFAMSSF50939. SSF50939. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF8EBW9_RUNSL
AccessionPrimary (citable) accession number: F8EBW9
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: February 19, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)