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F8DSK8 (F8DSK8_ZYMMA) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length349 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
   Molecular functionIsomerase RuleBase RU000608 SAAS SAAS020622 EMBL AEH63358.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F8DSK8 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 9A1B1F286508021C

FASTA34938,079
        10         20         30         40         50         60 
MQISSPLRLE LDKSALMANW QSLNRITAGH CGAAIKANGY GLGAERVRHY LAQAGCRDFF 

        70         80         90        100        110        120 
VSSWDEARLL DSSEKDFSLS VLHGLREDDL GYALNSSVKP VLCSPAMIAR WKAHAPNRPC 

       130        140        150        160        170        180 
DVMVDTGMNR LGLSMEEAGS GLLDGLSIDN ILSHLACADE ADHPLNQKQL ERFRILAARK 

       190        200        210        220        230        240 
QAKRYSLANS AGIFLSKDYH FDLARPGLAL YGGLPVPQSK DILKPVVAIA AQAIQVREVS 

       250        260        270        280        290        300 
AGEAIGYGAC FVTPKKMRVA ILHVGYADGY WRAFFEKGHA RKDGVICPLA GRVSMDMITV 

       310        320        330        340 
ALPDALTAQE GDWFSVDFDL PSASQQTGLS QYELLTGLGH RYQSVWQAI

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References

[1]"Genome sequence of the ethanol-producing Zymomonas mobilis subsp. mobilis lectotype strain ATCC 10988."
Pappas K.M., Kouvelis V.N., Saunders E., Brettin T.S., Bruce D., Detter C., Balakireva M., Han C.S., Savvakis G., Kyrpides N.C., Typas M.A.
J. Bacteriol. 193:5051-5052(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 10988 / DSM 424 / LMG 404 / NCIMB 8938 / NRRL B-806 / ZM1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002850 Genomic DNA. Translation: AEH63358.1.
RefSeqYP_005621809.1. NC_017262.1.

3D structure databases

ProteinModelPortalF8DSK8.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEH63358; AEH63358; Zmob_1543.
GeneID12281996.
KEGGzmm:Zmob_1543.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.

Enzyme and pathway databases

UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF8DSK8_ZYMMA
AccessionPrimary (citable) accession number: F8DSK8
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: April 3, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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