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F8DSK8

- F8DSK8_ZYMMA

UniProt

F8DSK8 - F8DSK8_ZYMMA

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Protein
Alanine racemase
Gene
Zmob_1543
Organism
Zymomonas mobilis subsp. mobilis (strain ATCC 10988 / DSM 424 / LMG 404 / NCIMB 8938 / NRRL B-806 / ZM1)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity.UniRule annotation

Catalytic activityi

L-alanine = D-alanine.UniRule annotationSAAS annotations

Cofactori

Pyridoxal phosphate By similarity.UniRule annotationSAAS annotations

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei36 – 361Proton acceptor; specific for D-alanine By similarityUniRule annotation
Binding sitei130 – 1301Substrate By similarityUniRule annotation
Active sitei247 – 2471Proton acceptor; specific for L-alanine By similarityUniRule annotation
Binding sitei295 – 2951Substrate; via amide nitrogen By similarityUniRule annotation

GO - Molecular functioni

  1. alanine racemase activity Source: UniProtKB-HAMAP
  2. pyridoxal phosphate binding Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

  1. D-alanine biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciZMOB555217:GLMZ-1589-MONOMER.
UniPathwayiUPA00042; UER00497.

Names & Taxonomyi

Protein namesi
Recommended name:
Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Zmob_1543Imported
OrganismiZymomonas mobilis subsp. mobilis (strain ATCC 10988 / DSM 424 / LMG 404 / NCIMB 8938 / NRRL B-806 / ZM1)Imported
Taxonomic identifieri555217 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeZymomonas
ProteomesiUP000001494: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei36 – 361N6-(pyridoxal phosphate)lysine By similarityUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliF8DSK8.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK01775.
OMAiPAGVCWR.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsiTIGR00492. alr. 1 hit.
PROSITEiPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F8DSK8-1 [UniParc]FASTAAdd to Basket

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MQISSPLRLE LDKSALMANW QSLNRITAGH CGAAIKANGY GLGAERVRHY    50
LAQAGCRDFF VSSWDEARLL DSSEKDFSLS VLHGLREDDL GYALNSSVKP 100
VLCSPAMIAR WKAHAPNRPC DVMVDTGMNR LGLSMEEAGS GLLDGLSIDN 150
ILSHLACADE ADHPLNQKQL ERFRILAARK QAKRYSLANS AGIFLSKDYH 200
FDLARPGLAL YGGLPVPQSK DILKPVVAIA AQAIQVREVS AGEAIGYGAC 250
FVTPKKMRVA ILHVGYADGY WRAFFEKGHA RKDGVICPLA GRVSMDMITV 300
ALPDALTAQE GDWFSVDFDL PSASQQTGLS QYELLTGLGH RYQSVWQAI 349
Length:349
Mass (Da):38,079
Last modified:September 21, 2011 - v1
Checksum:i9A1B1F286508021C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002850 Genomic DNA. Translation: AEH63358.1.
RefSeqiWP_014501122.1. NC_017262.1.
YP_005621809.1. NC_017262.1.

Genome annotation databases

EnsemblBacteriaiAEH63358; AEH63358; Zmob_1543.
GeneIDi12281996.
KEGGizmm:Zmob_1543.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002850 Genomic DNA. Translation: AEH63358.1 .
RefSeqi WP_014501122.1. NC_017262.1.
YP_005621809.1. NC_017262.1.

3D structure databases

ProteinModelPortali F8DSK8.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEH63358 ; AEH63358 ; Zmob_1543 .
GeneIDi 12281996.
KEGGi zmm:Zmob_1543.

Phylogenomic databases

KOi K01775.
OMAi PAGVCWR.

Enzyme and pathway databases

UniPathwayi UPA00042 ; UER00497 .
BioCyci ZMOB555217:GLMZ-1589-MONOMER.

Family and domain databases

Gene3Di 2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPi MF_01201. Ala_racemase.
InterProi IPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view ]
PRINTSi PR00992. ALARACEMASE.
SMARTi SM01005. Ala_racemase_C. 1 hit.
[Graphical view ]
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsi TIGR00492. alr. 1 hit.
PROSITEi PS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the ethanol-producing Zymomonas mobilis subsp. mobilis lectotype strain ATCC 10988."
    Pappas K.M., Kouvelis V.N., Saunders E., Brettin T.S., Bruce D., Detter C., Balakireva M., Han C.S., Savvakis G., Kyrpides N.C., Typas M.A.
    J. Bacteriol. 193:5051-5052(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 10988 / DSM 424 / LMG 404 / NCIMB 8938 / NRRL B-806 / ZM1.

Entry informationi

Entry nameiF8DSK8_ZYMMA
AccessioniPrimary (citable) accession number: F8DSK8
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: September 3, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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