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Protein
Submitted name:

Cytoplasmic alpha-amylase

Gene

HMPREF0833_10727

Organism
Streptococcus parasanguinis (strain ATCC 15912 / DSM 6778 / CIP 104372 / LMG 14537)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei240 – 2401NucleophileUniRule annotation
Active sitei270 – 2701Proton donorUniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciSPAR760570:GI5E-748-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Cytoplasmic alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Ordered Locus Names:HMPREF0833_10727Imported
OrganismiStreptococcus parasanguinis (strain ATCC 15912 / DSM 6778 / CIP 104372 / LMG 14537)Imported
Taxonomic identifieri760570 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
ProteomesiUP000001502: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF8DI48.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01176.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

F8DI48-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKEEIKMENQ TLMQYFEWYL PADGNHWTRL AEDAQHLADL GIRKVWMPPA
60 70 80 90 100
FKATSNNDVG YGVYDLFDLG EFDQKGTVRT KYGFKDDYLQ AIQALKDAGI
110 120 130 140 150
QPMADVVLNH KAAADGLEEF EVVEVDPMDR NKVLTEPFTI QGWTKFTFDG
160 170 180 190 200
RNGAYNDFHW HWYHFTGTDY DASRNKNGIY QIQGDNKGWA HGDLVDKENG
210 220 230 240 250
NYDYLMYADI DFKHPEVVEN LDQWAEWFIE TTGVEGFRLD AVKHIDSFFM
260 270 280 290 300
KNFIHNITKK YGEDFYVFGE FWNGDTETND EYLESIDYLY DLIDVALHQN
310 320 330 340 350
LFRASQEGEN FDLRTIFDGT LALNHPEEAV TFVDNHDTQR GQALESTIEE
360 370 380 390 400
WFKPAAYALI LLREAGLPCV FYGDYYGIKG KFAQESFQEV LDRLLWVRKD
410 420 430 440 450
LAYGEQTDYF DDPNCIGWTR SGTEEAAPIA CLISNNQATT KVMEIGSSYT
460 470 480 490
GLTYYDVLEN CSETVQVQED GTAEFPVAER SVSVWVAQDT EGQ
Length:493
Mass (Da):56,766
Last modified:September 21, 2011 - v1
Checksum:i6827AC13AEF913D9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002843 Genomic DNA. Translation: AEH55758.1.
RefSeqiYP_004621686.1. NC_015678.1.

Genome annotation databases

EnsemblBacteriaiAEH55758; AEH55758; HMPREF0833_10727.
GeneIDi10835226.
KEGGiscp:HMPREF0833_10727.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002843 Genomic DNA. Translation: AEH55758.1.
RefSeqiYP_004621686.1. NC_015678.1.

3D structure databases

ProteinModelPortaliF8DI48.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEH55758; AEH55758; HMPREF0833_10727.
GeneIDi10835226.
KEGGiscp:HMPREF0833_10727.

Phylogenomic databases

KOiK01176.
OrthoDBiEOG65QWH3.

Enzyme and pathway databases

BioCyciSPAR760570:GI5E-748-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Streptococcus parasanguinis strain ATCC 15912."
    Muzny D., Qin X., Buhay C., Dugan-Rocha S., Ding Y., Chen G., Hawes A., Holder M., Jhangiani S., Johnson A., Khan Z., Li Z., Liu W., Liu X., Perez L., Shen H., Wang Q., Watt J.
    , Xi L., Xin Y., Zhou J., Deng J., Jiang H., Liu Y., Qu J., Song X.-Z., Zhang L., Villasana D., Johnson A., Liu J., Liyanage D., Lorensuhewa L., Robinson T., Song A., Song B.-B., Dinh H., Thornton R., Coyle M., Francisco L., Jackson L., Javaid M., Korchina V., Kovar C., Mata R., Mathew T., Ngo R., Nguyen L., Nguyen N., Okwuonu G., Ongeri F., Pham C., Simmons D., Wilczek-Boney K., Hale W., Jakkamsetti A., Pham P., Ruth R., San Lucas F., Warren J., Zhang J., Zhao Z., Zhou C., Zhu D., Lee S., Bess C., Blankenburg K., Forbes L., Fu Q., Gubbala S., Hirani K., Jayaseelan J.C., Lara F., Munidasa M., Palculict T., Patil S., Pu L.-L., Saada N., Tang L., Weissenberger G., Zhu Y., Hemphill L., Shang Y., Youmans B., Ayvaz T., Ross M., Santibanez J., Aqrawi P., Gross S., Joshi V., Fowler G., Nazareth L., Reid J., Worley K., Petrosino J., Highlander S., Gibbs R.
    Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15912 / DSM 6778 / CIP 104372 / LMG 14537Imported.

Entry informationi

Entry nameiF8DI48_STREP
AccessioniPrimary (citable) accession number: F8DI48
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: February 4, 2015
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.