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F8CU85 (F8CU85_GEOTC) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608
Gene names
Ordered Locus Names:Geoth_3701 EMBL AEH49527.1
OrganismGeobacillus thermoglucosidasius (strain C56-YS93) [Complete proteome] [HAMAP] EMBL AEH49527.1
Taxonomic identifier634956 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Geobacillus ›

Protein attributes

Sequence length381 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. RuleBase RU004247 SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
   Molecular functionIsomerase RuleBase RU000608 SAAS SAAS020622 EMBL AEH49527.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F8CU85 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 31A6DD05C4F17E4B

FASTA38143,277
        10         20         30         40         50         60 
MFYRDTWAEI DLDAIYYNVS QLKNFLPNDV RIMAVVKANA YGHGDVQVAK TALEAGASYL 

        70         80         90        100        110        120 
AVAFLDEALA LRKGGIDAPI LVLGASRPSD INIAAKHRIT LTVFQAEWIE QAADFYSETA 

       130        140        150        160        170        180 
PVLFHLKMDT GMGRLGVKEE TETKRLIEQI DRHPYFSLEG VYTHFATADE INTGYFSFQY 

       190        200        210        220        230        240 
DNFLRMLEWL PYKPPLIHCG NSATTLRFPD KVFNMVRFGI SMYGLSPSPE IKQYLPYTLK 

       250        260        270        280        290        300 
EAFSLHSRLV HVKKLKPGEK VSYGATYTAE TEQWVGTVPI GYADGWLRKL QNFHVLVNGE 

       310        320        330        340        350        360 
KAPIIGRICM DQLMVRLPKQ LPVGTKVTLI GRQGDKYISV DDVAQYLDTI NYEIPCTISY 

       370        380 
RVPRIFFRNK SIMEVRNLVY A

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References

[1]"Complete sequence of chromosome of Geobacillus thermoglucosidasius C56-YS93."
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Brumm P. expand/collapse author list , Kourtz L., Mead D., Woyke T.
Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C56-YS93.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002835 Genomic DNA. Translation: AEH49527.1.
RefSeqYP_004589608.1. NC_015660.1.

3D structure databases

ProteinModelPortalF8CU85.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEH49527; AEH49527; Geoth_3701.
GeneID10789911.
KEGGgth:Geoth_3701.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.

Enzyme and pathway databases

BioCycGTHE634956:GHH3-3889-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF8CU85_GEOTC
AccessionPrimary (citable) accession number: F8CU85
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: April 3, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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