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F8CSV5 (F8CSV5_GEOTC) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.7.6.5 EMBL AEH47057.1
Gene names
Ordered Locus Names:Geoth_1060 EMBL AEH47057.1
OrganismGeobacillus thermoglucosidasius (strain C56-YS93) [Complete proteome] [HAMAP] EMBL AEH47057.1
Taxonomic identifier634956 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus

Protein attributes

Sequence length731 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance By similarity. RuleBase RU003847

Sequence similarities

Belongs to the relA/spoT family. RuleBase RU003847

Contains HD domain. SAAS SAAS002912

Ontologies

Keywords
   Molecular functionTransferase EMBL AEH47057.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processguanosine tetraphosphate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionGTP diphosphokinase activity

Inferred from electronic annotation. Source: UniProtKB-EC

amino acid binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F8CSV5 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 2FCC2AF5C7C7C8EC

FASTA73184,702
        10         20         30         40         50         60 
MANEQVLTAE QVFEQASYYL PEKDVEFIKK AYEFADRAHR DQYRKSGEPY IIHPIQVAGI 

        70         80         90        100        110        120 
LVDLKMDPAT IAAGFLHDVV EDTEATKEDL EREFGSEVAM LVDGVTKLGK IKYKSQEEQQ 

       130        140        150        160        170        180 
AENHRKMFLA MAQDIRVILI KLADRLHNMR TLKHLPIEKQ RRIANETLEI FAPLAHRLGI 

       190        200        210        220        230        240 
SKIKWELEDT ALRYLNPQQY YRIVNLMKKK RAEREQYLEE VIQEVRERLN EVSIPCEIYG 

       250        260        270        280        290        300 
RPKHIYSIYR KMVMQNKQFN EIYDLLAVRI IVNSIKDCYA VLGIIHTCWK PMPGRFKDYI 

       310        320        330        340        350        360 
AMPKPNMYQS LHTTVIGPKG EPLEVQIRTF EMHQIAEFGI AAHWAYKEGK TIKPNSFEEK 

       370        380        390        400        410        420 
LSWFREILEW QNDASNAEEF MESLKMDLFS DMVFVFTPKG DVIELPAGSV PIDFAYRIHS 

       430        440        450        460        470        480 
EIGNKTIGAK VNGKMVPLDY KLQTGDIVEI LTSKHSYGPS QDWLKLAQTS HAKNKIRQFF 

       490        500        510        520        530        540 
KKQRREENIE KGRELVEKEV RSLGFDVKEI LTAENVKRVA EKFNFSNEED MYAAVGFHGI 

       550        560        570        580        590        600 
TAAQIAHRLT DKWRKQRDLE EQQKKLTETM SETKVPVAKK RDCGIRVQGM DNLLIRLSRC 

       610        620        630        640        650        660 
CNPVPGDEII GFITRGRGIS VHRIDCPNVQ SEEAADRLIS VEWESDKSNR EYNVEIEITG 

       670        680        690        700        710        720 
YDRRGLLNEV LQAVNETKTD ISAVSGRSDH RNKIATIHMT IAIRNISHLQ KIVDRIKQIS 

       730 
DIYSVQRIMN N 

« Hide

References

[1]"Complete sequence of chromosome of Geobacillus thermoglucosidasius C56-YS93."
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Brumm P. expand/collapse author list , Kourtz L., Mead D., Woyke T.
Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C56-YS93.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002835 Genomic DNA. Translation: AEH47057.1.
RefSeqYP_004587138.1. NC_015660.1.

3D structure databases

ProteinModelPortalF8CSV5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEH47057; AEH47057; Geoth_1060.
GeneID10787213.
KEGGgth:Geoth_1060.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00951.

Enzyme and pathway databases

BioCycGTHE634956:GHH3-1096-MONOMER.

Family and domain databases

Gene3D3.10.20.30. 1 hit.
InterProIPR002912. ACT_dom.
IPR012675. Beta-grasp_dom.
IPR003607. HD/PDEase_dom.
IPR004811. RelA/Spo_fam.
IPR007685. RelA_SpoT.
IPR004095. TGS.
IPR012676. TGS-like.
[Graphical view]
PfamPF04607. RelA_SpoT. 1 hit.
PF02824. TGS. 1 hit.
[Graphical view]
SMARTSM00471. HDc. 1 hit.
SM00954. RelA_SpoT. 1 hit.
[Graphical view]
SUPFAMSSF81271. SSF81271. 1 hit.
TIGRFAMsTIGR00691. spoT_relA. 1 hit.
PROSITEPS51671. ACT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF8CSV5_GEOTC
AccessionPrimary (citable) accession number: F8CSV5
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: May 14, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)