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F8CR28

- F8CR28_MYXFH

UniProt

F8CR28 - F8CR28_MYXFH

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Protein
Submitted name:

DNA ligase

Gene
LILAB_05755
Organism
Myxococcus fulvus (strain ATCC BAA-855 / HW-1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC
  3. zinc ion binding Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMFUL483219:GJEO-1143-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:LILAB_05755Imported
OrganismiMyxococcus fulvus (strain ATCC BAA-855 / HW-1)Imported
Taxonomic identifieri483219 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeMyxococcaceaeMyxococcus
ProteomesiUP000000488: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiGKGQFEN.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
IPR007527. Znf_SWIM.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50966. ZF_SWIM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F8CR28-1 [UniParc]FASTAAdd to Basket

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MADIADGEQV SVKGSGAKPY ILKNTGGVYS CSCPAWRNQS VAIERRTCKH    50
LRRVRGDAAE DARIGGDATT APARPARTPS ASDDSKAPPL LLAQSWENDV 100
DLTGWWMSEK LDGVRAYWDG KQFWSRLGNA FLAPEWFTAG LPDFPLDGEL 150
FGGRKRFQRT VSIVRRQDRG DDWKELAFVV FDAPGVDGAF EARLERCRQW 200
MEEAKPAYAQ WHAHARCDGT PHLRAELARV EGLGGEGLML RQPGSRYEAG 250
RSHTLLKVKS FKDDEARVVG HVPGAGRHKG RLGALEVELR DGTRFNVGTG 300
LSDAERAAPP PVGAIITFRY QELSNDGVPR FPSYVGVRVD AAPFAAS 347
Length:347
Mass (Da):38,117
Last modified:September 21, 2011 - v1
Checksum:iDB64E39BC08D5B8D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002830 Genomic DNA. Translation: AEI63072.1.
RefSeqiWP_013936241.1. NC_015711.1.
YP_004664150.1. NC_015711.1.

Genome annotation databases

EnsemblBacteriaiAEI63072; AEI63072; LILAB_05755.
GeneIDi10875606.
KEGGimfu:LILAB_05755.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002830 Genomic DNA. Translation: AEI63072.1 .
RefSeqi WP_013936241.1. NC_015711.1.
YP_004664150.1. NC_015711.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEI63072 ; AEI63072 ; LILAB_05755 .
GeneIDi 10875606.
KEGGi mfu:LILAB_05755.

Phylogenomic databases

KOi K01971.
OMAi GKGQFEN.

Enzyme and pathway databases

BioCyci MFUL483219:GJEO-1143-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
IPR007527. Znf_SWIM.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
PS50966. ZF_SWIM. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the halotolerant marine bacterium Myxococcus fulvus HW-1."
    Li Z.F., Li X., Liu H., Liu X., Han K., Wu Z.H., Hu W., Li F.F., Li Y.Z.
    J. Bacteriol. 193:5015-5016(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-855 / HW-1.

Entry informationi

Entry nameiF8CR28_MYXFH
AccessioniPrimary (citable) accession number: F8CR28
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: September 3, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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