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F8CR28 (F8CR28_MYXFH) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length347 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
F8CR28 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: DB64E39BC08D5B8D

FASTA34738,117
        10         20         30         40         50         60 
MADIADGEQV SVKGSGAKPY ILKNTGGVYS CSCPAWRNQS VAIERRTCKH LRRVRGDAAE 

        70         80         90        100        110        120 
DARIGGDATT APARPARTPS ASDDSKAPPL LLAQSWENDV DLTGWWMSEK LDGVRAYWDG 

       130        140        150        160        170        180 
KQFWSRLGNA FLAPEWFTAG LPDFPLDGEL FGGRKRFQRT VSIVRRQDRG DDWKELAFVV 

       190        200        210        220        230        240 
FDAPGVDGAF EARLERCRQW MEEAKPAYAQ WHAHARCDGT PHLRAELARV EGLGGEGLML 

       250        260        270        280        290        300 
RQPGSRYEAG RSHTLLKVKS FKDDEARVVG HVPGAGRHKG RLGALEVELR DGTRFNVGTG 

       310        320        330        340 
LSDAERAAPP PVGAIITFRY QELSNDGVPR FPSYVGVRVD AAPFAAS 

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References

[1]"Genome Sequence of the Halotolerant Marine Bacterium Myxococcus fulvus HW-1."
Li Z.F., Li X., Liu H., Liu X., Han K., Wu Z.H., Hu W., Li F.F., Li Y.Z.
J. Bacteriol. 193:5015-5016(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-855 / HW-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002830 Genomic DNA. Translation: AEI63072.1.
RefSeqYP_004664150.1. NC_015711.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEI63072; AEI63072; LILAB_05755.
GeneID10875606.
KEGGmfu:LILAB_05755.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMAGKGQFEN.

Enzyme and pathway databases

BioCycMFUL483219:GJEO-1143-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
IPR007527. Znf_SWIM.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00333. DNA_LIGASE_A2. 1 hit.
PS50966. ZF_SWIM. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF8CR28_MYXFH
AccessionPrimary (citable) accession number: F8CR28
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: June 11, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)