F8CR28 (F8CR28_MYXFH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA ligase EMBL AEI63072.1
EC=6.5.1.1 EMBL AEI63072.1

Gene names

Ordered Locus Names:

LILAB_05755 EMBL AEI63072.1

Organism

Myxococcus fulvus (strain ATCC BAA-855 / HW-1) [Complete proteome] [HAMAP] EMBL AEI63072.1

Taxonomic identifier

483219 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Myxococcales › Cystobacterineae › Myxococcaceae › Myxococcus › Myxococcus fulvus

Protein attributes

Sequence length	347 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AEI63072.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F8CR28 [UniParc]. Last modified September 21, 2011. Version 1. Checksum: DB64E39BC08D5B8D	FASTA	347	38,117
	10 20 30 40 50 60 MADIADGEQV SVKGSGAKPY ILKNTGGVYS CSCPAWRNQS VAIERRTCKH LRRVRGDAAE 70 80 90 100 110 120 DARIGGDATT APARPARTPS ASDDSKAPPL LLAQSWENDV DLTGWWMSEK LDGVRAYWDG 130 140 150 160 170 180 KQFWSRLGNA FLAPEWFTAG LPDFPLDGEL FGGRKRFQRT VSIVRRQDRG DDWKELAFVV 190 200 210 220 230 240 FDAPGVDGAF EARLERCRQW MEEAKPAYAQ WHAHARCDGT PHLRAELARV EGLGGEGLML 250 260 270 280 290 300 RQPGSRYEAG RSHTLLKVKS FKDDEARVVG HVPGAGRHKG RLGALEVELR DGTRFNVGTG 310 320 330 340 LSDAERAAPP PVGAIITFRY QELSNDGVPR FPSYVGVRVD AAPFAAS

References

[1]

"Genome Sequence of the Halotolerant Marine Bacterium Myxococcus fulvus HW-1." Li Z.F., Li X., Liu H., Liu X., Han K., Wu Z.H., Hu W., Li F.F., Li Y.Z. J. Bacteriol. 193:5015-5016(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-855 / HW-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002830 Genomic DNA. Translation: AEI63072.1.
RefSeq	YP_004664150.1. NC_015711.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEI63072; AEI63072; LILAB_05755.
GeneID	10875606.
KEGG	mfu:LILAB_05755.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
OMA	VRGYWDG.
Enzyme and pathway databases
BioCyc	MFUL483219:GJEO-1143-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. IPR007527. Znf_SWIM. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00333. DNA_LIGASE_A2. 1 hit. PS50966. ZF_SWIM. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F8CR28_MYXFH

Accession

Primary (citable) accession number: F8CR28

Entry history

Integrated into UniProtKB/TrEMBL:	September 21, 2011
Last sequence update:	September 21, 2011
Last modified:	May 29, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)