Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

F8CR28

- F8CR28_MYXFH

UniProt

F8CR28 - F8CR28_MYXFH

Protein
Submitted name:

DNA ligase

Gene

LILAB_05755

Organism
Myxococcus fulvus (strain ATCC BAA-855 / HW-1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 18 (01 Oct 2014)
      Sequence version 1 (21 Sep 2011)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC
    3. zinc ion binding Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMFUL483219:GJEO-1143-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:LILAB_05755Imported
    OrganismiMyxococcus fulvus (strain ATCC BAA-855 / HW-1)Imported
    Taxonomic identifieri483219 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeMyxococcaceaeMyxococcus
    ProteomesiUP000000488: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.
    OMAiGKGQFEN.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    IPR007527. Znf_SWIM.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
    PS50966. ZF_SWIM. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F8CR28-1 [UniParc]FASTAAdd to Basket

    « Hide

    MADIADGEQV SVKGSGAKPY ILKNTGGVYS CSCPAWRNQS VAIERRTCKH    50
    LRRVRGDAAE DARIGGDATT APARPARTPS ASDDSKAPPL LLAQSWENDV 100
    DLTGWWMSEK LDGVRAYWDG KQFWSRLGNA FLAPEWFTAG LPDFPLDGEL 150
    FGGRKRFQRT VSIVRRQDRG DDWKELAFVV FDAPGVDGAF EARLERCRQW 200
    MEEAKPAYAQ WHAHARCDGT PHLRAELARV EGLGGEGLML RQPGSRYEAG 250
    RSHTLLKVKS FKDDEARVVG HVPGAGRHKG RLGALEVELR DGTRFNVGTG 300
    LSDAERAAPP PVGAIITFRY QELSNDGVPR FPSYVGVRVD AAPFAAS 347
    Length:347
    Mass (Da):38,117
    Last modified:September 21, 2011 - v1
    Checksum:iDB64E39BC08D5B8D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002830 Genomic DNA. Translation: AEI63072.1.
    RefSeqiWP_013936241.1. NC_015711.1.
    YP_004664150.1. NC_015711.1.

    Genome annotation databases

    EnsemblBacteriaiAEI63072; AEI63072; LILAB_05755.
    GeneIDi10875606.
    KEGGimfu:LILAB_05755.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002830 Genomic DNA. Translation: AEI63072.1 .
    RefSeqi WP_013936241.1. NC_015711.1.
    YP_004664150.1. NC_015711.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEI63072 ; AEI63072 ; LILAB_05755 .
    GeneIDi 10875606.
    KEGGi mfu:LILAB_05755.

    Phylogenomic databases

    KOi K01971.
    OMAi GKGQFEN.

    Enzyme and pathway databases

    BioCyci MFUL483219:GJEO-1143-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    IPR007527. Znf_SWIM.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
    PS50966. ZF_SWIM. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the halotolerant marine bacterium Myxococcus fulvus HW-1."
      Li Z.F., Li X., Liu H., Liu X., Han K., Wu Z.H., Hu W., Li F.F., Li Y.Z.
      J. Bacteriol. 193:5015-5016(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-855 / HW-1Imported.

    Entry informationi

    Entry nameiF8CR28_MYXFH
    AccessioniPrimary (citable) accession number: F8CR28
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 21, 2011
    Last sequence update: September 21, 2011
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3