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Protein

Pseudouridine synthase

Gene

LILAB_16710

Organism
Myxococcus fulvus (strain ATCC BAA-855 / HW-1)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Responsible for synthesis of pseudouridine from uracil.UniRule annotation

Catalytic activityi

RNA uridine = RNA pseudouridine.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomeraseUniRule annotationSAAS annotation, RNA-bindingPROSITE-ProRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciMFUL483219:G1GYV-3334-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
Gene namesi
Ordered Locus Names:LILAB_16710Imported
OrganismiMyxococcus fulvus (strain ATCC BAA-855 / HW-1)Imported
Taxonomic identifieri483219 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeMyxococcaceaeMyxococcus
Proteomesi
  • UP000000488 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi483219.LILAB_16710

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini13 – 80S4 RNA-bindingInterPro annotationAdd BLAST68

Sequence similaritiesi

Belongs to the pseudouridine synthase RluA family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105EI2 Bacteria
COG0564 LUCA
KOiK06179
OMAiPKTHVYR
OrthoDBiPOG091H064O

Family and domain databases

CDDicd02869 PseudoU_synth_RluCD_like, 1 hit
cd00165 S4, 1 hit
Gene3Di3.10.290.10, 1 hit
InterProiView protein in InterPro
IPR020103 PsdUridine_synth_cat_dom_sf
IPR006225 PsdUridine_synth_RluC/D
IPR006224 PsdUridine_synth_RluC/D_CS
IPR006145 PsdUridine_synth_RsuA/RluD
IPR002942 S4_RNA-bd
IPR036986 S4_RNA-bd_sf
PfamiView protein in Pfam
PF00849 PseudoU_synth_2, 1 hit
PF01479 S4, 1 hit
SMARTiView protein in SMART
SM00363 S4, 1 hit
SUPFAMiSSF55120 SSF55120, 1 hit
TIGRFAMsiTIGR00005 rluA_subfam, 1 hit
PROSITEiView protein in PROSITE
PS01129 PSI_RLU, 1 hit
PS50889 S4, 1 hit

Sequencei

Sequence statusi: Complete.

F8CLC0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIEYRIEADT AGMRLDKHLR KRLPNVPVSH LFKMIRTKKV RVNGKRAQPE
60 70 80 90 100
QLLSEGDVLT IRGDEQQLVG AERPKVDPPP PPVDPSRLVI LREDDWLMAV
110 120 130 140 150
DKPSGMAVHT GSGITGGTLV DYVRAWLGPK AVRNDFAASP AHRLDRETSG
160 170 180 190 200
VILVAKRRPA MVHFTEVFTH GLSRKRYLTL VKGKMPRDSG VIDLPLAEHQ
210 220 230 240 250
QTAESKARRG VNMQAAVTRW KVVKQSGEAA LLSCAIETGR THQIRRHLAA
260 270 280 290 300
IGHPVAGDKK YGDFAFNRDV RARWGLKRLF LHAERIEFPH PEGGAKVAVE
310
APLAAELRDV LKRAALVP
Length:318
Mass (Da):35,369
Last modified:September 21, 2011 - v1
Checksum:iF0BF0158D7AF2403
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002830 Genomic DNA Translation: AEI65245.1
RefSeqiWP_013938393.1, NC_015711.1

Genome annotation databases

EnsemblBacteriaiAEI65245; AEI65245; LILAB_16710
KEGGimfu:LILAB_16710

Similar proteinsi

Entry informationi

Entry nameiF8CLC0_MYXFH
AccessioniPrimary (citable) accession number: F8CLC0
Entry historyiIntegrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: May 23, 2018
This is version 37 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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