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F8CLC0

- F8CLC0_MYXFH

UniProt

F8CLC0 - F8CLC0_MYXFH

Protein

Pseudouridine synthase

Gene

LILAB_16710

Organism
Myxococcus fulvus (strain ATCC BAA-855 / HW-1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (21 Sep 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. pseudouridine synthase activity Source: InterPro
    2. RNA binding Source: InterPro

    GO - Biological processi

    1. pseudouridine synthesis Source: InterPro

    Keywords - Molecular functioni

    IsomeraseUniRule annotation

    Enzyme and pathway databases

    BioCyciMFUL483219:GJEO-3328-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
    Gene namesi
    Ordered Locus Names:LILAB_16710Imported
    OrganismiMyxococcus fulvus (strain ATCC BAA-855 / HW-1)Imported
    Taxonomic identifieri483219 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeMyxococcaceaeMyxococcus
    ProteomesiUP000000488: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the pseudouridine synthase rluA family.UniRule annotation

    Phylogenomic databases

    KOiK06179.
    OMAiVVELEYE.

    Family and domain databases

    Gene3Di3.10.290.10. 1 hit.
    InterProiIPR020103. PsdUridine_synth_cat_dom.
    IPR006225. PsdUridine_synth_RluC/D.
    IPR006224. PsdUridine_synth_RluC/D_CS.
    IPR006145. PsdUridine_synth_RsuA/RluD.
    IPR002942. S4_RNA-bd.
    [Graphical view]
    PfamiPF00849. PseudoU_synth_2. 1 hit.
    PF01479. S4. 1 hit.
    [Graphical view]
    SMARTiSM00363. S4. 1 hit.
    [Graphical view]
    SUPFAMiSSF55120. SSF55120. 1 hit.
    TIGRFAMsiTIGR00005. rluA_subfam. 1 hit.
    PROSITEiPS01129. PSI_RLU. 1 hit.
    PS50889. S4. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F8CLC0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIEYRIEADT AGMRLDKHLR KRLPNVPVSH LFKMIRTKKV RVNGKRAQPE    50
    QLLSEGDVLT IRGDEQQLVG AERPKVDPPP PPVDPSRLVI LREDDWLMAV 100
    DKPSGMAVHT GSGITGGTLV DYVRAWLGPK AVRNDFAASP AHRLDRETSG 150
    VILVAKRRPA MVHFTEVFTH GLSRKRYLTL VKGKMPRDSG VIDLPLAEHQ 200
    QTAESKARRG VNMQAAVTRW KVVKQSGEAA LLSCAIETGR THQIRRHLAA 250
    IGHPVAGDKK YGDFAFNRDV RARWGLKRLF LHAERIEFPH PEGGAKVAVE 300
    APLAAELRDV LKRAALVP 318
    Length:318
    Mass (Da):35,369
    Last modified:September 21, 2011 - v1
    Checksum:iF0BF0158D7AF2403
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002830 Genomic DNA. Translation: AEI65245.1.
    RefSeqiWP_013938393.1. NC_015711.1.
    YP_004666323.1. NC_015711.1.

    Genome annotation databases

    EnsemblBacteriaiAEI65245; AEI65245; LILAB_16710.
    GeneIDi10877791.
    KEGGimfu:LILAB_16710.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002830 Genomic DNA. Translation: AEI65245.1 .
    RefSeqi WP_013938393.1. NC_015711.1.
    YP_004666323.1. NC_015711.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEI65245 ; AEI65245 ; LILAB_16710 .
    GeneIDi 10877791.
    KEGGi mfu:LILAB_16710.

    Phylogenomic databases

    KOi K06179.
    OMAi VVELEYE.

    Enzyme and pathway databases

    BioCyci MFUL483219:GJEO-3328-MONOMER.

    Family and domain databases

    Gene3Di 3.10.290.10. 1 hit.
    InterProi IPR020103. PsdUridine_synth_cat_dom.
    IPR006225. PsdUridine_synth_RluC/D.
    IPR006224. PsdUridine_synth_RluC/D_CS.
    IPR006145. PsdUridine_synth_RsuA/RluD.
    IPR002942. S4_RNA-bd.
    [Graphical view ]
    Pfami PF00849. PseudoU_synth_2. 1 hit.
    PF01479. S4. 1 hit.
    [Graphical view ]
    SMARTi SM00363. S4. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55120. SSF55120. 1 hit.
    TIGRFAMsi TIGR00005. rluA_subfam. 1 hit.
    PROSITEi PS01129. PSI_RLU. 1 hit.
    PS50889. S4. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the halotolerant marine bacterium Myxococcus fulvus HW-1."
      Li Z.F., Li X., Liu H., Liu X., Han K., Wu Z.H., Hu W., Li F.F., Li Y.Z.
      J. Bacteriol. 193:5015-5016(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-855 / HW-1Imported.

    Entry informationi

    Entry nameiF8CLC0_MYXFH
    AccessioniPrimary (citable) accession number: F8CLC0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 21, 2011
    Last sequence update: September 21, 2011
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3