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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

LILAB_15900

Organism
Myxococcus fulvus (strain ATCC BAA-855 / HW-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMFUL483219:GJEO-3166-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:LILAB_15900Imported
OrganismiMyxococcus fulvus (strain ATCC BAA-855 / HW-1)Imported
Taxonomic identifieri483219 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeMyxococcaceaeMyxococcus
ProteomesiUP000000488 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF8CIL7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK10747.
OMAiGQPYPFF.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F8CIL7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRRLADLYET LDQTMSTNAK VEALARYFQE APPEDAAWAL YFLTGQKLKR
60 70 80 90 100
LIPTKLLVGW TQELTGIPGW LFEEVYASTG DLAEVIALLL DARERPARTE
110 120 130 140 150
ELPLSVWLEQ RLLPLRRLDA AGQREQVVSW WHAMPRRELF LLNKMLTGEL
160 170 180 190 200
RVGVSSTLVV RAVAQVAGLP APSVAHRLMG TWTPSATFFR QLVSPDVSDG
210 220 230 240 250
DSSRPYPFYL ASPLEQPAED LGERAEWQVE WKWDGIRGQL IRRKGSVHLW
260 270 280 290 300
SRGEELITER FPEIADAAAL LPDGTVLDGE VLAHADGRPL PFAQLQRRIG
310 320 330 340 350
RQKLTPKVLA EAPAAFMAYD VLELGGEDLR GQPLRERRAK LEALLQGMPR
360 370 380 390 400
LPISPVVQAA TWEDLATARG EARERNVEGF MLKRLASPYL TGRKRGDWWK
410 420 430 440 450
WKIDPFTVDA VLLYAHPGHG RRSSLYTDYT FAVWNGTELQ PVTKAYSGLT
460 470 480 490 500
DAEIGRLDRW IRAHTREKYG PVRSVEPEQV FELHFEGIQS SPRHKSGVAL
510 520 530
RFPRIARWRT DKKPRDADTL DSLKELLHAS G
Length:531
Mass (Da):60,137
Last modified:September 21, 2011 - v1
Checksum:i399CA376C401B9B1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002830 Genomic DNA. Translation: AEI65083.1.
RefSeqiWP_013938234.1. NC_015711.1.
YP_004666161.1. NC_015711.1.

Genome annotation databases

EnsemblBacteriaiAEI65083; AEI65083; LILAB_15900.
KEGGimfu:LILAB_15900.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002830 Genomic DNA. Translation: AEI65083.1.
RefSeqiWP_013938234.1. NC_015711.1.
YP_004666161.1. NC_015711.1.

3D structure databases

ProteinModelPortaliF8CIL7.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEI65083; AEI65083; LILAB_15900.
KEGGimfu:LILAB_15900.

Phylogenomic databases

KOiK10747.
OMAiGQPYPFF.

Enzyme and pathway databases

BioCyciMFUL483219:GJEO-3166-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the halotolerant marine bacterium Myxococcus fulvus HW-1."
    Li Z.F., Li X., Liu H., Liu X., Han K., Wu Z.H., Hu W., Li F.F., Li Y.Z.
    J. Bacteriol. 193:5015-5016(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-855 / HW-1Imported.

Entry informationi

Entry nameiF8CIL7_MYXFH
AccessioniPrimary (citable) accession number: F8CIL7
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: May 27, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.