F8C5E9 (F8C5E9_THESO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
BioY protein EMBL AEH22923.1

Gene names

Ordered Locus Names:

TOPB45_0825 EMBL AEH22923.1

Organism

Thermodesulfobacterium sp. (strain OPB45) [Complete proteome] [HAMAP] EMBL AEH22923.1

Taxonomic identifier

795359 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Thermodesulfobacteria › Thermodesulfobacteria › Thermodesulfobacteriales › Thermodesulfobacteriaceae › Thermodesulfobacterium › Thermodesulfobacterium geofontis

Protein attributes

Sequence length	791 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Cell outer membrane By similarity RuleBase RU003357.
Sequence similarities	Belongs to the TonB-dependent receptor family. RuleBase RU003357

Ontologies

Keywords
Cellular component	Cell membrane RuleBase RU003357 Membrane
Domain	TonB box RuleBase RU003357
Technical term	Complete proteome
Gene Ontology (GO)
Cellular_component	cell outer membrane Inferred from electronic annotation. Source: UniProtKB-SubCell plasma membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	biotin transporter activity Inferred from electronic annotation. Source: InterPro receptor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F8C5E9 [UniParc]. Last modified September 21, 2011. Version 1. Checksum: 453A555437F10E8D	FASTA	791	91,305
	10 20 30 40 50 60 MEGLVIEAKI KRIAIVDVIL PKIENKTFVL LRNIFLVLSF TLLTAISAQL KIEIGPVPIT 70 80 90 100 110 120 GQTFAVLLCG ALLGAKRGFL SQFFYLLEGL AGIPWFAGGG GISFLVSPSF GYIIGFVLAA 130 140 150 160 170 180 FVVGFLCERG FDRRITTAIL AMLVGNILIY APGLLWLARF VGWEKVLAFG LYPFIIGDIL 190 200 210 220 230 240 KLLLAASILP LGWRLLKRKY SVLFLILFLI CTHQSAFSSE KPLYTLENEE SVYTLEEVKV 250 260 270 280 290 300 VSPAKGADLE KISQEVKVVK KEELSEFGLK KVFSALELKE RGTFGVQADL SIRGTSFEQN 310 320 330 340 350 360 LVVLEGIRIS DPQTGHHLMK LPLEEDILES LEILSGGASA IYGPGGFGGA INFNLEPSTK 370 380 390 400 410 420 GYKILAEYGS YDYQHIFGNF GFSTSEIPFN LVFSQKKSNG FIWNRDFDIR TFNLYSKDDK 430 440 450 460 470 480 KTLFYGFQEK DFGARNFYIT KYDTEWESTK THLFLVKKNI YKNNWFLEPT LLYRINYDLY 490 500 510 520 530 540 LLDRKNPDFY KNTHKSQVFR LNFPLRYERT YMDYLLGVEV SYETLESSRL GDHLRQSTGF 550 560 570 580 590 600 YFWLYPKISL RFFPSFGIRY DVITQNKDIF TYNLGFAYLL KEDLKLRSSF SFSYRIPSFT 610 620 630 640 650 660 EFYYDSPTIK GNPSLSPEKA YNISVGFDYY KNKINFSGTG FYRYGKDIID WIKKENIIQA 670 680 690 700 710 720 QNIEILKTVG FTLDSNIIFK NFKPFISYTY LNQIAEKLPS ARYSGSYLRH NFILGIIYNL 730 740 750 760 770 780 PWHWEFFGSL NYREYYKRDK IFLVDLKIKK KFGKNLTYSF WIKNLLDEDY KEIGEVKAPP 790 QWIGINLEIR F

References

[1]

"Complete sequence of Thermodesulfobacterium sp. OPB45." Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Hamilton-Brehm S., Elkins J., Woyke T. Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: OPB45.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002829 Genomic DNA. Translation: AEH22923.1.
RefSeq	YP_004627851.1. NC_015682.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEH22923; AEH22923; TOPB45_0825.
GeneID	10839394.
KEGG	top:TOPB45_0825.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K02014.
OMA	ASYWIND.
Family and domain databases
Gene3D	2.170.130.10. 1 hit. 2.40.170.20. 1 hit.
InterPro	IPR003784. BioY. IPR012910. Plug. IPR000531. TonB-dep_rcpt_b-brl. [Graphical view]
Pfam	PF02632. BioY. 1 hit. PF07715. Plug. 1 hit. PF00593. TonB_dep_Rec. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F8C5E9_THESO

Accession

Primary (citable) accession number: F8C5E9

Entry history

Integrated into UniProtKB/TrEMBL:	September 21, 2011
Last sequence update:	September 21, 2011
Last modified:	April 3, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)