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Protein

Superoxide dismutase

Gene

TOPB45_1521

Organism
Thermodesulfobacterium geofontis (strain OPF15)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

Metal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciTSP795359:GI1V-1569-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:TOPB45_1521Imported
OrganismiThermodesulfobacterium geofontis (strain OPF15)Imported
Taxonomic identifieri795359 [NCBI]
Taxonomic lineageiBacteriaThermodesulfobacteriaThermodesulfobacterialesThermodesulfobacteriaceaeThermodesulfobacterium
Proteomesi
  • UP000006583 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi795359.TOPB45_1521.

Structurei

3D structure databases

ProteinModelPortaliF8C524.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini24 – 8057Sod_Fe_NInterPro annotationAdd
BLAST
Domaini90 – 189100Sod_Fe_CInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107XIJ. Bacteria.
COG0605. LUCA.
KOiK04564.
OMAiDLKLHNY.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.

Sequencei

Sequence statusi: Complete.

F8C524-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYEAKDYSKL VGMKGFSEIL LKNHFTLYNG YVTNCNKLLE ALMKMFEEDE
60 70 80 90 100
VGTPEFAELK RRLGWEWNGM RLHELYFENL GGNGIFPQEG ILSKLINEQF
110 120 130 140 150
GSFENWKKEF IGIGLMRGIG WVILYQDIYT GKLINFWINE HDIGHPAGGN
160 170 180 190
PLLVMDVFEH AYIIDYGLKK KDYIKTFFDN INWNEVEKRI IK
Length:192
Mass (Da):22,550
Last modified:September 21, 2011 - v1
Checksum:iB8E274D45481A971
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002829 Genomic DNA. Translation: AEH23599.1.
RefSeqiWP_013910297.1. NC_015682.1.

Genome annotation databases

EnsemblBacteriaiAEH23599; AEH23599; TOPB45_1521.
KEGGitop:TOPB45_1521.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002829 Genomic DNA. Translation: AEH23599.1.
RefSeqiWP_013910297.1. NC_015682.1.

3D structure databases

ProteinModelPortaliF8C524.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi795359.TOPB45_1521.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEH23599; AEH23599; TOPB45_1521.
KEGGitop:TOPB45_1521.

Phylogenomic databases

eggNOGiENOG4107XIJ. Bacteria.
COG0605. LUCA.
KOiK04564.
OMAiDLKLHNY.

Enzyme and pathway databases

BioCyciTSP795359:GI1V-1569-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Thermodesulfobacterium sp. OPB45."
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Hamilton-Brehm S., Elkins J., Woyke T.
    Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: OPB45Imported.

Entry informationi

Entry nameiF8C524_THEGP
AccessioniPrimary (citable) accession number: F8C524
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: April 13, 2016
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.