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F8C4I6 (F8C4I6_THESO) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length353 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEH23070.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processRNA processing

Inferred from electronic annotation. Source: InterPro

   Molecular_functionRNA-3'-phosphate cyclase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F8C4I6 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: AB7C554025919637

FASTA35339,625
        10         20         30         40         50         60 
MILIDGSYGE GGGQILRTCL SLSVVLGKPF KIFKIRAGRP KPGLQPQHLA CVKACAEISK 

        70         80         90        100        110        120 
AELEGAELNS KELIFIPKEK PTNKTYFFDI KTAGSTSLLF QTLLYPLALS EGGELILKGG 

       130        140        150        160        170        180 
THVPFSPSFH YLKYVFLPIV NFLGLKAEIY LEKAGFYPKG GGKIRAKIFP WKEFKLPNIS 

       190        200        210        220        230        240 
KKFDPDEIFI ISLISEDLPS HILERQAISA KKKLLTAQLK SPKEIFEKVK SDSPGTMLFI 

       250        260        270        280        290        300 
YSIDKDKIKR VGFFELGKKG YPAEKVGENS AIQFLEFLKT EAQFEEHLGD QILLPLTFAI 

       310        320        330        340        350 
IKNREKIFIY KTSKITKHLL TQAWVIPQFM KEINIEVLGK EGNPGEVKIS LLN

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References

[1]"Complete sequence of Thermodesulfobacterium sp. OPB45."
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Hamilton-Brehm S., Elkins J., Woyke T.
Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: OPB45.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002829 Genomic DNA. Translation: AEH23070.1.
RefSeqYP_004627998.1. NC_015682.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEH23070; AEH23070; TOPB45_0975.
GeneID10839546.
KEGGtop:TOPB45_0975.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01974.
OMAFEHTIAG.

Family and domain databases

Gene3D3.30.360.20. 1 hit.
3.65.10.20. 2 hits.
InterProIPR013791. RNA3'-term_phos_cycl_insert.
IPR023797. RNA3'_phos_cyclase_dom.
IPR000228. RNA3'_term_phos_cyc.
IPR017770. RNA3'_term_phos_cyc_type_1.
IPR013792. RNA3'P_cycl/enolpyr_Trfase_a/b.
[Graphical view]
PANTHERPTHR11096. PTHR11096. 1 hit.
PfamPF01137. RTC. 1 hit.
PF05189. RTC_insert. 1 hit.
[Graphical view]
SUPFAMSSF52913. RNA3'-term_phos_cycl_insert. 1 hit.
SSF55205. RNA3'_cycl/enolpyr_transf_A/B. 1 hit.
TIGRFAMsTIGR03399. RNA_3prim_cycl. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF8C4I6_THESO
AccessionPrimary (citable) accession number: F8C4I6
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: May 1, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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