F8BPM7 (F8BPM7_OLICM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Elongation factor Ts HAMAP-Rule MF_00050
Short name=EF-Ts HAMAP-Rule MF_00050

Gene names

Name:	tsf HAMAP-Rule MF_00050 EMBL AEI03197.1
Ordered Locus Names:	OCA4_c20660 EMBL AEI03197.1

Organism

Oligotropha carboxidovorans (strain OM4) [Complete proteome] [HAMAP] EMBL AEI03197.1

Taxonomic identifier

1031710 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Oligotropha › Oligotropha carboxidovorans

Protein attributes

Sequence length	307 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome By similarity. HAMAP-Rule MF_00050 RuleBase RU000642
Subcellular location	Cytoplasm By similarity HAMAP-Rule MF_00050 RuleBase RU000643.
Sequence similarities	Belongs to the EF-Ts family. HAMAP-Rule MF_00050 RuleBase RU000642

Ontologies

Keywords
Biological process	Protein biosynthesis
Cellular component	Cytoplasm HAMAP-Rule MF_00050
Molecular function	Elongation factor HAMAP-Rule MF_00050 RuleBase RU000642 EMBL AEI03197.1
Technical term	Complete proteome
Gene Ontology (GO)
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	translation elongation factor activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Region	80 – 83	4	Involved in Mg(2+) ion dislocation from EF-Tu By similarity HAMAP-Rule MF_00050

Sequences

	Sequence		Length	Mass (Da)
	F8BPM7 [UniParc]. Last modified September 21, 2011. Version 1. Checksum: 6663CC4D6776DACF	FASTA	307	31,746
	10 20 30 40 50 60 MATITAAMVK ELREKTGAGM MDCKQALTEN DGNIDAAVDW LRKKGLSKAA KKAGRVAAEG 70 80 90 100 110 120 LIGALVSGNK GVLVEVNSET DFVARNEQFQ GLVKMIAQVA LDAGTDVEAI KAAKVGGVTV 130 140 150 160 170 180 ETAISDAIAT IGENMTLRRA AALSVSNGVV ASYIHNAVTD GLGKMGVIVA LESTGKADEL 190 200 210 220 230 240 AALGRQIAMH VAAANPQALD AAGLDPQVVA RETDVLADKY RQQGKPDNVI AKIVESGLKT 250 260 270 280 290 300 YYKEVTLLEQ AFIHDSGKSV AQAVKEAEGK VGAPIKVAGF VRYALGEGIE KEEADFAAEV AAAAGQG

References

[1]

"Complete Genome Sequences of the Chemolithoautotrophic Oligotropha carboxidovorans Strains OM4 and OM5." Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., Meyer O. J. Bacteriol. 193:5043-5043(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: OM4 EMBL AEI03197.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002821 Genomic DNA. Translation: AEI03197.1.
RefSeq	YP_005951078.1. NC_017538.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEI03197; AEI03197; OCA4_c20660.
GeneID	12541896.
KEGG	oco:OCA4_c20660.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K02357.
OMA	YLHGTRI.
Enzyme and pathway databases
BioCyc	OCAR1031710:GLI1-2066-MONOMER.
Family and domain databases
Gene3D	3.30.479.20. 3 hits.
HAMAP	MF_00050. EF_Ts.
InterPro	IPR001816. Transl_elong_EFTs/EF1B. IPR014039. Transl_elong_EFTs/EF1B_dimer. IPR018101. Transl_elong_Ts_CS. IPR009060. UBA-like. IPR000449. UBA/transl_elong_EF1B_N. [Graphical view]
PANTHER	PTHR11741. PTHR11741. 1 hit.
Pfam	PF00889. EF_TS. 1 hit. PF00627. UBA. 1 hit. [Graphical view]
SUPFAM	SSF54713. EF_TS. 1 hit. SSF46934. UBA_like. 1 hit.
TIGRFAMs	TIGR00116. tsf. 1 hit.
PROSITE	PS01126. EF_TS_1. 1 hit. PS01127. EF_TS_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F8BPM7_OLICM

Accession

Primary (citable) accession number: F8BPM7

Entry history

Integrated into UniProtKB/TrEMBL:	September 21, 2011
Last sequence update:	September 21, 2011
Last modified:	May 29, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)