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F8BMG2 (F8BMG2_OLICM) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.5.1.1 EMBL AEI03912.1
Gene names
Name:lig EMBL AEI03912.1
Ordered Locus Names:OCA4_c27950 EMBL AEI03912.1
OrganismOligotropha carboxidovorans (strain OM4) [Complete proteome] [HAMAP] EMBL AEI03912.1
Taxonomic identifier1031710 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeOligotropha

Protein attributes

Sequence length563 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
F8BMG2 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 11802521D813060D

FASTA56363,106
        10         20         30         40         50         60 
MNRFAHLLDR LAYEPGRNNK LRLITAYFRE VPDPDRGWAL AALTGALSFR HAKPGLIRDL 

        70         80         90        100        110        120 
ITARTDPALF ALSYDYVGDL SETVALMWPS VHASTNGDAK HSPTLTEIVT TLHTLGKTEI 

       130        140        150        160        170        180 
PAQLASWLDE LDETGRWALL KLVTGGLRIG VSARLAKTAA AALGDKDPHE IELIWPGLAP 

       190        200        210        220        230        240 
PYLDLFAWLE GRAEKPINRD PAPFRPVMLA HAIEDSDFAG LDPADFIAEW KWDGIRVQAV 

       250        260        270        280        290        300 
SGRKSEEHVL ARLYSRSGED ITASFPDLVP SLRLPGAIDG ELLVLREGRV QSFNVLQQRL 

       310        320        330        340        350        360 
NRKSVTPKLM KDYPIHLRAY DLLAEGEDDL RDLPFIDRRA RLERFIARLD DPRIDLSPQV 

       370        380        390        400        410        420 
VFATWDDLTA ARANPSDAGA GDDADAVEGV MLKRRDALYL PGRQRGQWWK WKHDPHVIDA 

       430        440        450        460        470        480 
VLMYAQRGHG KRSSYYSDYT FGVWTVGEGG DELVPVGKAY FGFTDEELVQ IDRFVRRNTV 

       490        500        510        520        530        540 
EKFGPVRHVV HEPNKGLVLE VAFEGLARSP RHKSGVAMRF PRISRLRWDK PPGEADRLET 

       550        560 
LKRLLKEDLA SVVAEGLLGR RAG 

« Hide

References

[1]"Complete genome sequences of the chemolithoautotrophic Oligotropha carboxidovorans strains OM4 and OM5."
Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., Meyer O.
J. Bacteriol. 193:5043-5043(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: OM4 EMBL AEI03912.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002821 Genomic DNA. Translation: AEI03912.1.
RefSeqYP_005951793.1. NC_017538.1.

3D structure databases

ProteinModelPortalF8BMG2.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEI03912; AEI03912; OCA4_c27950.
GeneID12542625.
KEGGoco:OCA4_c27950.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMAGQPYPFF.

Enzyme and pathway databases

BioCycOCAR1031710:GLI1-2795-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF8BMG2_OLICM
AccessionPrimary (citable) accession number: F8BMG2
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: December 11, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)