F8BMG2 (F8BMG2_OLICM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase Lig EMBL AEI03912.1
EC=6.5.1.1 EMBL AEI03912.1

Gene names

Name:	lig EMBL AEI03912.1
Ordered Locus Names:	OCA4_c27950 EMBL AEI03912.1

Organism

Oligotropha carboxidovorans (strain OM4) [Complete proteome] [HAMAP] EMBL AEI03912.1

Taxonomic identifier

1031710 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Oligotropha › Oligotropha carboxidovorans

Protein attributes

Sequence length	563 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AEI03912.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F8BMG2 [UniParc]. Last modified September 21, 2011. Version 1. Checksum: 11802521D813060D	FASTA	563	63,106
	10 20 30 40 50 60 MNRFAHLLDR LAYEPGRNNK LRLITAYFRE VPDPDRGWAL AALTGALSFR HAKPGLIRDL 70 80 90 100 110 120 ITARTDPALF ALSYDYVGDL SETVALMWPS VHASTNGDAK HSPTLTEIVT TLHTLGKTEI 130 140 150 160 170 180 PAQLASWLDE LDETGRWALL KLVTGGLRIG VSARLAKTAA AALGDKDPHE IELIWPGLAP 190 200 210 220 230 240 PYLDLFAWLE GRAEKPINRD PAPFRPVMLA HAIEDSDFAG LDPADFIAEW KWDGIRVQAV 250 260 270 280 290 300 SGRKSEEHVL ARLYSRSGED ITASFPDLVP SLRLPGAIDG ELLVLREGRV QSFNVLQQRL 310 320 330 340 350 360 NRKSVTPKLM KDYPIHLRAY DLLAEGEDDL RDLPFIDRRA RLERFIARLD DPRIDLSPQV 370 380 390 400 410 420 VFATWDDLTA ARANPSDAGA GDDADAVEGV MLKRRDALYL PGRQRGQWWK WKHDPHVIDA 430 440 450 460 470 480 VLMYAQRGHG KRSSYYSDYT FGVWTVGEGG DELVPVGKAY FGFTDEELVQ IDRFVRRNTV 490 500 510 520 530 540 EKFGPVRHVV HEPNKGLVLE VAFEGLARSP RHKSGVAMRF PRISRLRWDK PPGEADRLET 550 560 LKRLLKEDLA SVVAEGLLGR RAG

References

[1]

"Complete Genome Sequences of the Chemolithoautotrophic Oligotropha carboxidovorans Strains OM4 and OM5." Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., Meyer O. J. Bacteriol. 193:5043-5043(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: OM4 EMBL AEI03912.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002821 Genomic DNA. Translation: AEI03912.1.
RefSeq	YP_005951793.1. NC_017538.1.
3D structure databases
ProteinModelPortal	F8BMG2.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEI03912; AEI03912; OCA4_c27950.
GeneID	12542625.
KEGG	oco:OCA4_c27950.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
OMA	AYDLLEW.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F8BMG2_OLICM

Accession

Primary (citable) accession number: F8BMG2

Entry history

Integrated into UniProtKB/TrEMBL:	September 21, 2011
Last sequence update:	September 21, 2011
Last modified:	April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)