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F8BMG2

- F8BMG2_OLICM

UniProt

F8BMG2 - F8BMG2_OLICM

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Protein
Submitted name:

ATP-dependent DNA ligase Lig

Gene

lig

Organism
Oligotropha carboxidovorans (strain OM4)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciOCAR1031710:GLI1-2795-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligase LigImported (EC:6.5.1.1Imported)
Gene namesi
Name:ligImported
Ordered Locus Names:OCA4_c27950Imported
OrganismiOligotropha carboxidovorans (strain OM4)Imported
Taxonomic identifieri1031710 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeOligotropha
ProteomesiUP000000487: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF8BMG2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiNRHKSGV.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F8BMG2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNRFAHLLDR LAYEPGRNNK LRLITAYFRE VPDPDRGWAL AALTGALSFR
60 70 80 90 100
HAKPGLIRDL ITARTDPALF ALSYDYVGDL SETVALMWPS VHASTNGDAK
110 120 130 140 150
HSPTLTEIVT TLHTLGKTEI PAQLASWLDE LDETGRWALL KLVTGGLRIG
160 170 180 190 200
VSARLAKTAA AALGDKDPHE IELIWPGLAP PYLDLFAWLE GRAEKPINRD
210 220 230 240 250
PAPFRPVMLA HAIEDSDFAG LDPADFIAEW KWDGIRVQAV SGRKSEEHVL
260 270 280 290 300
ARLYSRSGED ITASFPDLVP SLRLPGAIDG ELLVLREGRV QSFNVLQQRL
310 320 330 340 350
NRKSVTPKLM KDYPIHLRAY DLLAEGEDDL RDLPFIDRRA RLERFIARLD
360 370 380 390 400
DPRIDLSPQV VFATWDDLTA ARANPSDAGA GDDADAVEGV MLKRRDALYL
410 420 430 440 450
PGRQRGQWWK WKHDPHVIDA VLMYAQRGHG KRSSYYSDYT FGVWTVGEGG
460 470 480 490 500
DELVPVGKAY FGFTDEELVQ IDRFVRRNTV EKFGPVRHVV HEPNKGLVLE
510 520 530 540 550
VAFEGLARSP RHKSGVAMRF PRISRLRWDK PPGEADRLET LKRLLKEDLA
560
SVVAEGLLGR RAG
Length:563
Mass (Da):63,106
Last modified:September 21, 2011 - v1
Checksum:i11802521D813060D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002821 Genomic DNA. Translation: AEI03912.1.
RefSeqiWP_012562335.1. NC_017538.1.
YP_005951793.1. NC_017538.1.

Genome annotation databases

EnsemblBacteriaiAEI03912; AEI03912; OCA4_c27950.
GeneIDi12542625.
KEGGioco:OCA4_c27950.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002821 Genomic DNA. Translation: AEI03912.1 .
RefSeqi WP_012562335.1. NC_017538.1.
YP_005951793.1. NC_017538.1.

3D structure databases

ProteinModelPortali F8BMG2.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEI03912 ; AEI03912 ; OCA4_c27950 .
GeneIDi 12542625.
KEGGi oco:OCA4_c27950.

Phylogenomic databases

KOi K01971.
OMAi NRHKSGV.

Enzyme and pathway databases

BioCyci OCAR1031710:GLI1-2795-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequences of the chemolithoautotrophic Oligotropha carboxidovorans strains OM4 and OM5."
    Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., Meyer O.
    J. Bacteriol. 193:5043-5043(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: OM4Imported.

Entry informationi

Entry nameiF8BMG2_OLICM
AccessioniPrimary (citable) accession number: F8BMG2
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: October 1, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3