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F8BF63 (F8BF63_LISMM) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribonucleoside-diphosphate reductase subunit beta PIRNR PIRNR000355
EC=1.17.4.1 PIRNR PIRNR000355
Gene names
Name:nrdF EMBL AEH93261.1
Ordered Locus Names:LMM7_2256 EMBL AEH93261.1
OrganismListeria monocytogenes serotype 4a (strain M7) [Complete proteome] [HAMAP]
Taxonomic identifier1030009 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Listeriaceae › Listeria ›

Protein attributes

Sequence length349 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides By similarity. PIRNR PIRNR000355

Catalytic activity

2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. PIRNR PIRNR000355

Cofactor

Binds 2 iron ions per subunit By similarity. PIRNR PIRNR000355

Pathway

Genetic information processing; DNA replication. PIRNR PIRNR000355

Sequence similarities

Belongs to the ribonucleoside diphosphate reductase small chain family. PIRNR PIRNR000355

Sequences

Sequence LengthMass (Da)Tools
F8BF63 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: D2F7BAD346A973E1

FASTA34940,217
        10         20         30         40         50         60 
MANQKEQLTR IKILEPLFPN RSTSIINGET SGILNWNDIP YPSFYRAYKE LSTNYWIPDE 

        70         80         90        100        110        120 
VDMKSDAKQY PALSEQEKYA FDAIIGLLAT LDSPQTRFIY NIAEYITDPA VHANAAIIAQ 

       130        140        150        160        170        180 
QEVIHNESYS YVLASITNLQ EQNRVFELAR THPTIIKRNE PIMDAYDDFM NNKTGETLVK 

       190        200        210        220        230        240 
ALIQSSILEG INFYSGFAYF YNLVRQNKMT GTGKIISFIN RDELAHSKFI SEVIRAILGE 

       250        260        270        280        290        300 
NPELQTEELV EYTHEAFRHA VELETEWSEE VLQGIEGIDV EEMVDYVKYR ANKMLGMLGI 

       310        320        330        340 
PELYPGHSDN TMTWIKAYAD NFTETKTDFF EMRNSSYKKT NMDNGFDDL

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References

[1]"Genome sequence of the nonpathogenic Listeria monocytogenes serovar 4a strain M7."
Chen J., Xia Y., Cheng C., Fang C., Shan Y., Jin G., Fang W.
J. Bacteriol. 193:5019-5020(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: M7 EMBL AEH93261.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002816 Genomic DNA. Translation: AEH93261.1.
RefSeqYP_005948319.1. NC_017537.1.

3D structure databases

ProteinModelPortalF8BF63.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEH93261; AEH93261; LMM7_2256.
GeneID12539079.
KEGGlmq:LMM7_2256.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00526.

Enzyme and pathway databases

UniPathwayUPA00326.

Family and domain databases

Gene3D1.10.620.20. 1 hit.
InterProIPR009078. Ferritin-like_SF.
IPR012348. RNR-rel.
IPR026023. RNR_bsu_prok.
IPR000358. RNR_small.
[Graphical view]
PANTHERPTHR23409. PTHR23409. 1 hit.
PfamPF00268. Ribonuc_red_sm. 1 hit.
[Graphical view]
PIRSFPIRSF000355. NrdB. 1 hit.
SUPFAMSSF47240. Ferritin/RR_like. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF8BF63_LISMM
AccessionPrimary (citable) accession number: F8BF63
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: May 1, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info