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F8BB62 (F8BB62_LISMM) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Isocitrate dehydrogenase [NADP] RuleBase RU004446
EC=1.1.1.42 RuleBase RU004446
Gene names
Name:citC EMBL AEH92657.1
Ordered Locus Names:LMM7_1652 EMBL AEH92657.1
OrganismListeria monocytogenes serotype 4a (strain M7) [Complete proteome] [HAMAP]
Taxonomic identifier1030009 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Listeriaceae › Listeria ›

Protein attributes

Sequence length420 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH. RuleBase RU004446

Cofactor

Binds 1 magnesium or manganese ion per subunit By similarity. RuleBase RU004446

Sequence similarities

Belongs to the isocitrate and isopropylmalate dehydrogenases family. RuleBase RU004443

Sequences

Sequence LengthMass (Da)Tools
F8BB62 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 46CF5C8D72C65F4B

FASTA42046,178
        10         20         30         40         50         60 
MSQKIQVENG VLKTPNNPVI PFIEGDGTGP DIWAAAKRVL DAAVKKAYNG EKEIAWKEVL 

        70         80         90        100        110        120 
AGEKAFKQTG EWLPQATLDT IDEYLIAIKG PLTTPIGGGI RSLNVALRQE LDLYVCLRPV 

       130        140        150        160        170        180 
RYFKGVPSPV KRPEDTDMVI FRENTEDIYA GIEFKEGSVE SKKLIDFLKS EFGVDKIRFP 

       190        200        210        220        230        240 
ETSGIGIKPI SKEGTERLVR SAIEYTIKEG RKSLTLVHKG NIMKFTEGAF KNWGYDLCER 

       250        260        270        280        290        300 
EYGDKVFTWN EYDRIKEAEG TEVADAKQKE ALAAGKILVK DSIADIFLQQ ILTRPAEFDV 

       310        320        330        340        350        360 
VATMNLNGDY ISDALAAQVG GIGIAPGANI NYLTGHAIFE ATHGTAPKYA GLDKVNPSSV 

       370        380        390        400        410        420 
ILSGTLLLEH IGWGEAAALI NQSMEKTIAA KTVTYDFARL MDGATEVKCS EFADELIKNF

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References

[1]"Genome sequence of the nonpathogenic Listeria monocytogenes serovar 4a strain M7."
Chen J., Xia Y., Cheng C., Fang C., Shan Y., Jin G., Fang W.
J. Bacteriol. 193:5019-5020(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: M7 EMBL AEH92657.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002816 Genomic DNA. Translation: AEH92657.1.
RefSeqYP_005947715.1. NC_017537.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEH92657; AEH92657; LMM7_1652.
GeneID12538441.
KEGGlmq:LMM7_1652.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00031.

Family and domain databases

Gene3D3.40.718.10. 1 hit.
InterProIPR019818. IsoCit/isopropylmalate_DH_CS.
IPR001804. Isocitrate/isopropylmalate_DH.
IPR004439. Isocitrate_DH_NADP_dimer_prok.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PANTHERPTHR11835. PTHR11835. 1 hit.
PfamPF00180. Iso_dh. 1 hit.
[Graphical view]
TIGRFAMsTIGR00183. prok_nadp_idh. 1 hit.
PROSITEPS00470. IDH_IMDH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF8BB62_LISMM
AccessionPrimary (citable) accession number: F8BB62
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: April 3, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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