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F8AUZ4 (F8AUZ4_FRADG) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length442 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 RuleBase RU004247 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201 RuleBase RU004247

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site401Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2721Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1381Substrate By similarity HAMAP-Rule MF_01201
Binding site3201Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue401N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
F8AUZ4 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 2919D5013DA8C90F

FASTA44244,366
        10         20         30         40         50         60 
MTTQSEGLRA CAIVDLDAVR ASVATLVARA GNAATMAVVK SDGYGHGMSA CARAAVEAGA 

        70         80         90        100        110        120 
SWLGVAVIEE GLALRAAGFT VPVFAWLTAP GEPLADALAA DIDLSASAPW MLAEIAAAAR 

       130        140        150        160        170        180 
HTGRRARVHL KADTGLGRGG ATEADWPSLC DAAAALAAED LIEVTGVWSH LAFADSPGHP 

       190        200        210        220        230        240 
TVRGQIGRFA DAVTIAEKTG LRPQVRHLAN SAATLVSPDA RFDMVRPGIS VYGLSPGPQV 

       250        260        270        280        290        300 
GSPAALGLRP AMTLTARLAL AKRVPAGSGV SYAHRYTTAV ASTLGLVPLG YADGVPRAAG 

       310        320        330        340        350        360 
NTAEVLLAGR RRRIAGTVCM DQFVVDVGDD PVQAGDQVIL FGSGEHGEPT AQDWADALGT 

       370        380        390        400        410        420 
INYEIVTRVG VRVPRVHLNA SDGPRGTGRQ APGGPGAARP APGMAGSAPA AVGPSDAGLS 

       430        440 
GAGSSGPGLP GAGPSAPGWL PS 

« Hide

References

[1]"Complete sequence of chromosome of Frankia symbiont of Datisca glomerata."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Chertkov O., Teshima H., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Berry A. expand/collapse author list , Pawlowski K., Persson T., Vanden Heuvel B., Benson D., Woyke T.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 4085684 EMBL AEH11197.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002801 Genomic DNA. Translation: AEH11197.1.
RefSeqYP_004585118.1. NC_015656.1.

3D structure databases

ProteinModelPortalF8AUZ4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEH11197; AEH11197; FsymDg_3922.
GeneID10784610.
KEGGfsy:FsymDg_3922.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.
OMAITMDQLM.

Enzyme and pathway databases

BioCycFSYM656024:GHLT-3953-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF8AUZ4_FRADG
AccessionPrimary (citable) accession number: F8AUZ4
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: February 19, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)