F8AUZ4 (F8AUZ4_FRADG) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Ordered Locus Names:

FsymDg_3922 EMBL AEH11197.1

Organism

Frankia symbiont subsp. Datisca glomerata [Complete proteome] [HAMAP] EMBL AEH11197.1

Taxonomic identifier

656024 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	442 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. RuleBase RU004247 SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622 EMBL AEH11197.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F8AUZ4 [UniParc]. Last modified September 21, 2011. Version 1. Checksum: 2919D5013DA8C90F	FASTA	442	44,366
	10 20 30 40 50 60 MTTQSEGLRA CAIVDLDAVR ASVATLVARA GNAATMAVVK SDGYGHGMSA CARAAVEAGA 70 80 90 100 110 120 SWLGVAVIEE GLALRAAGFT VPVFAWLTAP GEPLADALAA DIDLSASAPW MLAEIAAAAR 130 140 150 160 170 180 HTGRRARVHL KADTGLGRGG ATEADWPSLC DAAAALAAED LIEVTGVWSH LAFADSPGHP 190 200 210 220 230 240 TVRGQIGRFA DAVTIAEKTG LRPQVRHLAN SAATLVSPDA RFDMVRPGIS VYGLSPGPQV 250 260 270 280 290 300 GSPAALGLRP AMTLTARLAL AKRVPAGSGV SYAHRYTTAV ASTLGLVPLG YADGVPRAAG 310 320 330 340 350 360 NTAEVLLAGR RRRIAGTVCM DQFVVDVGDD PVQAGDQVIL FGSGEHGEPT AQDWADALGT 370 380 390 400 410 420 INYEIVTRVG VRVPRVHLNA SDGPRGTGRQ APGGPGAARP APGMAGSAPA AVGPSDAGLS 430 440 GAGSSGPGLP GAGPSAPGWL PS

References

[1]

"Complete sequence of chromosome of Frankia symbiont of Datisca glomerata." US DOE Joint Genome Institute Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Chertkov O., Teshima H., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Berry A. , Pawlowski K., Persson T., Vanden Heuvel B., Benson D., Woyke T. Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 4085684 EMBL AEH11197.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002801 Genomic DNA. Translation: AEH11197.1.
RefSeq	YP_004585118.1. NC_015656.1.
3D structure databases
ProteinModelPortal	F8AUZ4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEH11197; AEH11197; FsymDg_3922.
GeneID	10784610.
KEGG	fsy:FsymDg_3922.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01775.
OMA	GQWQDIA.
Enzyme and pathway databases
BioCyc	FSYM656024:GHLT-3966-MONOMER.
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F8AUZ4_FRADG

Accession

Primary (citable) accession number: F8AUZ4

Entry history

Integrated into UniProtKB/TrEMBL:	September 21, 2011
Last sequence update:	September 21, 2011
Last modified:	April 3, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)