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Protein
Submitted name:

Type II site-specific deoxyribonuclease

Gene

Metok_0256

Organism
Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA restriction-modification system Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciMOKI647113:GHB9-257-MONOMER.

Protein family/group databases

REBASEi36503. MokIH1ORF255P.

Names & Taxonomyi

Protein namesi
Submitted name:
Type II site-specific deoxyribonucleaseImported (EC:3.1.21.4Imported)
Gene namesi
Ordered Locus Names:Metok_0256Imported
OrganismiMethanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1)Imported
Taxonomic identifieri647113 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanococcaceaeMethanothermococcus
ProteomesiUP000009296: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01155.
OMAiTNYYGGG.

Family and domain databases

InterProiIPR011335. Restrct_endonuc-II-like.
IPR021191. Restrct_endonuc_II_DpmII.
IPR007637. Restrct_endonuc_II_DpmII-like.
[Graphical view]
PfamiPF04556. DpnII. 1 hit.
[Graphical view]
PIRSFiPIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
SUPFAMiSSF52980. SSF52980. 1 hit.

Sequencei

Sequence statusi: Complete.

F8ANQ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDFEYIINNL LDTIKTYDFF VDWNKVENNV KKIEKRLCIL NYLIGKENFK
60 70 80 90 100
GEFFGLLKEY PEVITVFPIL IAVRDDEIKI LNENVEVEDL DFKEKSNLSD
110 120 130 140 150
KEIERYYEFF KKSGLEELLK NKKIKNLVDY VFGVEVGMDT NARKNRTGKI
160 170 180 190 200
MENIVEKYIM ENLANHKELE YIPQATKNKI KHKWRIDLIL DKTNRKFDFA
210 220 230 240 250
LYNKNTKILY LIEVNFYSGG GSKLKSTAGE YETLNEFIHN NNKNVKFIWI
260 270 280 290
TDGKGWTTAK NPLNESFNSG VTILNLKMIK DGILKDIVLK
Length:290
Mass (Da):34,116
Last modified:September 21, 2011 - v1
Checksum:iF32DE819B09406F9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002792 Genomic DNA. Translation: AEH06248.1.
RefSeqiYP_004576026.1. NC_015636.1.

Genome annotation databases

EnsemblBacteriaiAEH06248; AEH06248; Metok_0256.
GeneIDi10772373.
KEGGimok:Metok_0256.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002792 Genomic DNA. Translation: AEH06248.1.
RefSeqiYP_004576026.1. NC_015636.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

REBASEi36503. MokIH1ORF255P.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEH06248; AEH06248; Metok_0256.
GeneIDi10772373.
KEGGimok:Metok_0256.

Phylogenomic databases

KOiK01155.
OMAiTNYYGGG.

Enzyme and pathway databases

BioCyciMOKI647113:GHB9-257-MONOMER.

Family and domain databases

InterProiIPR011335. Restrct_endonuc-II-like.
IPR021191. Restrct_endonuc_II_DpmII.
IPR007637. Restrct_endonuc_II_DpmII-like.
[Graphical view]
PfamiPF04556. DpnII. 1 hit.
[Graphical view]
PIRSFiPIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
SUPFAMiSSF52980. SSF52980. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Methanothermococcus okinawensis IH1."
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Held B., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Sieprawska-Lupa M., Takai K.
    , Miyazaki J., Whitman W., Woyke T.
    Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 14208 / JCM 11175 / IH1Imported.

Entry informationi

Entry nameiF8ANQ0_METOI
AccessioniPrimary (citable) accession number: F8ANQ0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: March 4, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.