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F8ALF3 (F8ALF3_METOI) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F8ALF3 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: F2AB4D944D52FEA6

FASTA39646,950
        10         20         30         40         50         60 
MDIDILKVSE RLKLDEVDIK KAFERKIISF DMYHNKKYLL FKKKLRHIER GTVLFLNNNM 

        70         80         90        100        110        120 
DIVMGYPKIR RAMMLYPTLK NYFINKIVVE EKLDGYNVRI TKIDNKVMAI TRGGRICPFT 

       130        140        150        160        170        180 
TKKALKFLNV NILDDYPNLM LCGEMIGLNN PYVPHYYPEV NNILIKSDKN NNKKTKIIEN 

       190        200        210        220        230        240 
LGFYIFDVRY RETNKPLSIS EKEELLQKYE LPYVKPIGIF NKEDIEHIKK IILTLNDKKR 

       250        260        270        280        290        300 
EGVVLKDPDM IINPIKYTTH YTQCNDLSVA FRYMYDLGID FMFSRLVREG YQSFEFNEDE 

       310        320        330        340        350        360 
KEMEKRAKNI GKSILYPMVN SIKNISKGEL ITEDFEIYLD SEEDLNEFLD YLKKLHIAFV 

       370        380        390 
VKENQKFENG MHKVKIGRIY NSTNDKIKSH LDGNLW 

« Hide

References

[1]"Complete sequence of chromosome of Methanothermococcus okinawensis IH1."
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Held B., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Sieprawska-Lupa M., Takai K. expand/collapse author list , Miyazaki J., Whitman W., Woyke T.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 14208 / JCM 11175 / IH1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002792 Genomic DNA. Translation: AEH06542.1.
RefSeqYP_004576320.1. NC_015636.1.

3D structure databases

ProteinModelPortalF8ALF3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEH06542; AEH06542; Metok_0562.
GeneID10772688.
KEGGmok:Metok_0562.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK07468.
OMAEEKMNGY.

Enzyme and pathway databases

BioCycMOKI647113:GHB9-572-MONOMER.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSPR01048. Y414FAMILY.
TIGRFAMsTIGR01209. TIGR01209. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF8ALF3_METOI
AccessionPrimary (citable) accession number: F8ALF3
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: April 16, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)