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F8AGT3 (F8AGT3_PYRYC) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:PYCH_15530 EMBL AEH25219.1
OrganismPyrococcus yayanosii (strain CH1 / JCM 16557) [Complete proteome] [HAMAP] EMBL AEH25219.1
Taxonomic identifier529709 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus

Protein attributes

Sequence length379 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F8AGT3 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: 37FC9C44BFB939EF

FASTA37943,914
        10         20         30         40         50         60 
MVSSHFKEIL MRLGLPEDRI EVLEAKGGIT EEEFDGIRYL RFKDSARGLR RGTVVFDEAN 

        70         80         90        100        110        120 
VILGFPHIKR VVSLRAGVMR IFKRTPFYVE EKVDGYNVRV ALVSDRVLAI TRGGFVCPFT 

       130        140        150        160        170        180 
TERILDFVPE EFFKDYPHLV LVGEMAGPES PYLVEGPPYV EEDIRFFLFD IQEKGTGKSL 

       190        200        210        220        230        240 
PVQERLKLAE EYGIPHVKVF GLYTVDRIED LYDLIERLSR EGREGVVMKS PDMKRVVKYV 

       250        260        270        280        290        300 
TPFANVNDVK IGAKVFFELP PGYFMSRIMR LAFYVAERRI KGERFEELAR NLGKALLEPF 

       310        320        330        340        350        360 
VESIWDVEQG DEIAEVFRIR VKRIETAYKM VTHFERLGLN IKIEDIEEVG GMWRITFKRA 

       370 
YDEATREIRE LIGGRAFVD 

« Hide

References

[1]"Complete genome sequence of the obligate piezophilic hyperthermophilic archaeon Pyrococcus yayanosii CH1."
Jun X., Lupeng L., Minjuan X., Oger P., Fengping W., Jebbar M., Xiang X.
J. Bacteriol. 193:4297-4298(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CH1 / JCM 16557.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002779 Genomic DNA. Translation: AEH25219.1.
RefSeqYP_004624491.1. NC_015680.1.

3D structure databases

ProteinModelPortalF8AGT3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEH25219; AEH25219; PYCH_15530.
GeneID10838122.
KEGGpya:PYCH_15530.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK07468.
OMAEEKMNGY.

Enzyme and pathway databases

BioCycPYAY529709:GHZ0-1582-MONOMER.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSPR01048. Y414FAMILY.
TIGRFAMsTIGR01209. TIGR01209. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF8AGT3_PYRYC
AccessionPrimary (citable) accession number: F8AGT3
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: April 16, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)