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Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

PYCH_03360

Organism
Pyrococcus yayanosii (strain CH1 / JCM 16557)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciPYAY529709:GHZ0-342-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported
Gene namesi
Ordered Locus Names:PYCH_03360Imported
OrganismiPyrococcus yayanosii (strain CH1 / JCM 16557)Imported
Taxonomic identifieri529709 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
ProteomesiUP000008386 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi529709.PYCH_03360.

Structurei

3D structure databases

ProteinModelPortaliF8AGQ5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

KOiK00823.
OMAiCVAKPMG.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F8AGQ5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDPEEVVAGY ERVIAPANRT TYFPLVPVRA ENARIWDVKG REYIDFLSDA
60 70 80 90 100
AVQNVGHNNP RIVMAIKEQA ERLLHASFIY AFPIEPLLLA EKLVQLVPIR
110 120 130 140 150
NAKVSFGLSG ADANDGAIKF ARAYTGRLTI LSYMRSFYGS TYGAMSITGL
160 170 180 190 200
DFHVRALVGE LSGVHYIPFP NCYRCPFGKE SGKCRFECVE YLKEKFEGEV
210 220 230 240 250
YAEGVAALFA EAIQGDAGMV VPPENYFKRI ERILDEHGIL LVVDEIQSGL
260 270 280 290 300
GRTGKWFAIE HFGVEPDIIT VAKPLGGGLP ISATIGRAEI MDALPPLSHA
310 320 330 340 350
FTLSGNPTAA RAALAVIEEI EEKDLVKRAE RLGEKAKRRL ERMKARHELI
360 370 380 390 400
GDVRGLGLML GVELVKDRET KERALDETKK VVWRAFELGL IVAFLQGNVL
410 420 430 440
RIQPPLTIEE ELLEEGLERL EEAIEDVEAG KVPDDVVKKV RGW
Length:443
Mass (Da):49,242
Last modified:September 21, 2011 - v1
Checksum:i35CA230E9B2B4BB2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002779 Genomic DNA. Translation: AEH24031.1.
RefSeqiWP_013905088.1. NC_015680.1.
YP_004623303.1. NC_015680.1.

Genome annotation databases

EnsemblBacteriaiAEH24031; AEH24031; PYCH_03360.
GeneIDi10836912.
KEGGipya:PYCH_03360.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002779 Genomic DNA. Translation: AEH24031.1.
RefSeqiWP_013905088.1. NC_015680.1.
YP_004623303.1. NC_015680.1.

3D structure databases

ProteinModelPortaliF8AGQ5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi529709.PYCH_03360.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEH24031; AEH24031; PYCH_03360.
GeneIDi10836912.
KEGGipya:PYCH_03360.

Phylogenomic databases

KOiK00823.
OMAiCVAKPMG.

Enzyme and pathway databases

BioCyciPYAY529709:GHZ0-342-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the obligate piezophilic hyperthermophilic archaeon Pyrococcus yayanosii CH1."
    Jun X., Lupeng L., Minjuan X., Oger P., Fengping W., Jebbar M., Xiang X.
    J. Bacteriol. 193:4297-4298(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CH1 / JCM 16557Imported.

Entry informationi

Entry nameiF8AGQ5_PYRYC
AccessioniPrimary (citable) accession number: F8AGQ5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: July 22, 2015
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.