Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

ATP dependent DNA ligase

Gene

Thein_0777

Organism
Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciTIND667014:GI6G-793-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Thein_0777Imported
OrganismiThermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812)Imported
Taxonomic identifieri667014 [NCBI]
Taxonomic lineageiBacteriaThermodesulfobacteriaThermodesulfobacterialesThermodesulfobacteriaceaeThermodesulfatator
ProteomesiUP000006793 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF8ACF4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK07468.
OMAiEEKMNGY.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

F8ACF4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIEEEFKKQT ELLREVYQAL RPLRKVRLED LEKALEQSKL LFIEGLKKPA
60 70 80 90 100
FRFRREFRGF PAGTVIGPGL LMPGFPSIPR VFVLKTGIPR YIYGPFYAEE
110 120 130 140 150
KIEGYNVRLA NVFGEIKAFT RRGYVCPFAT DRWPDFLPML PEFFEKYPRY
160 170 180 190 200
VICCEVAGPE NPFVSEWPPY IKEDVAFFVF DIFDLERQKF LAPEKKYALL
210 220 230 240 250
REYEFRTPEI SGPYSPQEID PLKGLILRYE EEGREGVVLK PVSFKDGRVI
260 270 280 290 300
KYVTSSSNVS DLRVAFPYIG ELDASYIVHR LVRMTITRWE LDQPFDENFY
310 320 330 340 350
QALGEAFFGE MKELLDKVAQ GEPVEEVFKV RLRRKESLEA LMAHFRTAQV
360 370 380 390
RIEIRREEWK DEYLHVEFAK IYPKATSFWA GKLQGLAQID
Length:390
Mass (Da):45,805
Last modified:September 21, 2011 - v1
Checksum:iEA5778A5965F7658
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002683 Genomic DNA. Translation: AEH44655.1.
RefSeqiWP_013907399.1. NC_015681.1.
YP_004625619.1. NC_015681.1.

Genome annotation databases

EnsemblBacteriaiAEH44655; AEH44655; Thein_0777.
KEGGitid:Thein_0777.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002683 Genomic DNA. Translation: AEH44655.1.
RefSeqiWP_013907399.1. NC_015681.1.
YP_004625619.1. NC_015681.1.

3D structure databases

ProteinModelPortaliF8ACF4.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEH44655; AEH44655; Thein_0777.
KEGGitid:Thein_0777.

Phylogenomic databases

KOiK07468.
OMAiEEKMNGY.

Enzyme and pathway databases

BioCyciTIND667014:GI6G-793-MONOMER.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 15286 / JCM 11887 / CIR29812Imported.

Entry informationi

Entry nameiF8ACF4_THEID
AccessioniPrimary (citable) accession number: F8ACF4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: May 27, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.