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F8AA06

- F8AA06_THEID

UniProt

F8AA06 - F8AA06_THEID

Protein
Submitted name:

DNA polymerase LigD, ligase domain protein

Gene

Thein_1426

Organism
Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (21 Sep 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciTIND667014:GI6G-1462-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA polymerase LigD, ligase domain proteinImported
    Gene namesi
    Ordered Locus Names:Thein_1426Imported
    OrganismiThermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812)Imported
    Taxonomic identifieri667014 [NCBI]
    Taxonomic lineageiBacteriaThermodesulfobacteriaThermodesulfobacterialesThermodesulfobacteriaceaeThermodesulfatator
    ProteomesiUP000006793: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliF8AA06.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.
    OMAiVEVKYGQ.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F8AA06-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLPAYIKPML AKLSSPFDSP RFLYEIKWDG TRCLIFIENG KVRLQNRRLN    50
    DITYRYPEFW DLPKLVPGDG IIFDGEIVVL KDGRPEFRLL QEREHVKSPL 100
    KIKMLSERLP ATYMAFDLLY FEGKPILDKP LRERKALLKE LLPESPFVAE 150
    SQYILEKGVA FFEQVVAQGF EGVMAKDLES PYLPGKRVDF WLKFKPRGKR 200
    TCVIVGYLLR PDGTLKSLLI AEPTEKGLVY RGKVASGLNT HLSAELLIRL 250
    KGLEDKKPEN LKGRGFPKGA RWVKPEIYCE VSFQEITNHG QFRAPVLEKV 300
    FL 302
    Length:302
    Mass (Da):34,800
    Last modified:September 21, 2011 - v1
    Checksum:iF060C455AA14B710
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002683 Genomic DNA. Translation: AEH45292.1.
    RefSeqiYP_004626256.1. NC_015681.1.

    Genome annotation databases

    EnsemblBacteriaiAEH45292; AEH45292; Thein_1426.
    GeneIDi10841686.
    KEGGitid:Thein_1426.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002683 Genomic DNA. Translation: AEH45292.1 .
    RefSeqi YP_004626256.1. NC_015681.1.

    3D structure databases

    ProteinModelPortali F8AA06.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEH45292 ; AEH45292 ; Thein_1426 .
    GeneIDi 10841686.
    KEGGi tid:Thein_1426.

    Phylogenomic databases

    KOi K01971.
    OMAi VEVKYGQ.

    Enzyme and pathway databases

    BioCyci TIND667014:GI6G-1462-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 15286 / JCM 11887 / CIR29812Imported.

    Entry informationi

    Entry nameiF8AA06_THEID
    AccessioniPrimary (citable) accession number: F8AA06
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 21, 2011
    Last sequence update: September 21, 2011
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3