F8AA06 (F8AA06_THEID) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA polymerase LigD, ligase domain protein EMBL AEH45292.1

Gene names

Ordered Locus Names:

Thein_1426 EMBL AEH45292.1

Organism

Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) [Complete proteome] [HAMAP] EMBL AEH45292.1

Taxonomic identifier

667014 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Thermodesulfobacteria › Thermodesulfobacteria › Thermodesulfobacteriales › Thermodesulfobacteriaceae › Thermodesulfatator › Thermodesulfatator indicus

Protein attributes

Sequence length	302 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AEH45292.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F8AA06 [UniParc]. Last modified September 21, 2011. Version 1. Checksum: F060C455AA14B710	FASTA	302	34,800
	10 20 30 40 50 60 MLPAYIKPML AKLSSPFDSP RFLYEIKWDG TRCLIFIENG KVRLQNRRLN DITYRYPEFW 70 80 90 100 110 120 DLPKLVPGDG IIFDGEIVVL KDGRPEFRLL QEREHVKSPL KIKMLSERLP ATYMAFDLLY 130 140 150 160 170 180 FEGKPILDKP LRERKALLKE LLPESPFVAE SQYILEKGVA FFEQVVAQGF EGVMAKDLES 190 200 210 220 230 240 PYLPGKRVDF WLKFKPRGKR TCVIVGYLLR PDGTLKSLLI AEPTEKGLVY RGKVASGLNT 250 260 270 280 290 300 HLSAELLIRL KGLEDKKPEN LKGRGFPKGA RWVKPEIYCE VSFQEITNHG QFRAPVLEKV FL

References

[1]

"The complete genome of Thermodesulfatator indicus DSM 15286." Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S., Peters L., Kyrpides N., Mavromatis K., Pagani I., Ivanova N., Saunders L., Detter J.C., Tapia R., Han C., Land M., Hauser L., Markowitz V. , Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., Schroeder M., Brambilla E., Klenk H.-P., Eisen J.A. Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 15286 / JCM 11887 / CIR29812.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002683 Genomic DNA. Translation: AEH45292.1.
RefSeq	YP_004626256.1. NC_015681.1.
3D structure databases
ProteinModelPortal	F8AA06.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEH45292; AEH45292; Thein_1426.
GeneID	10841686.
KEGG	tid:Thein_1426.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
Enzyme and pathway databases
BioCyc	TIND667014:GI6G-1462-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR014146. DNA_pol_LigD_ligase_dom. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F8AA06_THEID

Accession

Primary (citable) accession number: F8AA06

Entry history

Integrated into UniProtKB/TrEMBL:	September 21, 2011
Last sequence update:	September 21, 2011
Last modified:	May 29, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)