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F8AA06

- F8AA06_THEID

UniProt

F8AA06 - F8AA06_THEID

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Protein
Submitted name:

DNA polymerase LigD, ligase domain protein

Gene

Thein_1426

Organism
Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciTIND667014:GI6G-1462-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, ligase domain proteinImported
Gene namesi
Ordered Locus Names:Thein_1426Imported
OrganismiThermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812)Imported
Taxonomic identifieri667014 [NCBI]
Taxonomic lineageiBacteriaThermodesulfobacteriaThermodesulfobacterialesThermodesulfobacteriaceaeThermodesulfatator
ProteomesiUP000006793: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF8AA06.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiVEVKYGQ.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F8AA06-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLPAYIKPML AKLSSPFDSP RFLYEIKWDG TRCLIFIENG KVRLQNRRLN
60 70 80 90 100
DITYRYPEFW DLPKLVPGDG IIFDGEIVVL KDGRPEFRLL QEREHVKSPL
110 120 130 140 150
KIKMLSERLP ATYMAFDLLY FEGKPILDKP LRERKALLKE LLPESPFVAE
160 170 180 190 200
SQYILEKGVA FFEQVVAQGF EGVMAKDLES PYLPGKRVDF WLKFKPRGKR
210 220 230 240 250
TCVIVGYLLR PDGTLKSLLI AEPTEKGLVY RGKVASGLNT HLSAELLIRL
260 270 280 290 300
KGLEDKKPEN LKGRGFPKGA RWVKPEIYCE VSFQEITNHG QFRAPVLEKV

FL
Length:302
Mass (Da):34,800
Last modified:September 21, 2011 - v1
Checksum:iF060C455AA14B710
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002683 Genomic DNA. Translation: AEH45292.1.
RefSeqiYP_004626256.1. NC_015681.1.

Genome annotation databases

EnsemblBacteriaiAEH45292; AEH45292; Thein_1426.
GeneIDi10841686.
KEGGitid:Thein_1426.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002683 Genomic DNA. Translation: AEH45292.1 .
RefSeqi YP_004626256.1. NC_015681.1.

3D structure databases

ProteinModelPortali F8AA06.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEH45292 ; AEH45292 ; Thein_1426 .
GeneIDi 10841686.
KEGGi tid:Thein_1426.

Phylogenomic databases

KOi K01971.
OMAi VEVKYGQ.

Enzyme and pathway databases

BioCyci TIND667014:GI6G-1462-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 15286 / JCM 11887 / CIR29812Imported.

Entry informationi

Entry nameiF8AA06_THEID
AccessioniPrimary (citable) accession number: F8AA06
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: October 1, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3