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F8AA06 (F8AA06_THEID) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length302 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEH45292.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F8AA06 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: F060C455AA14B710

FASTA30234,800
        10         20         30         40         50         60 
MLPAYIKPML AKLSSPFDSP RFLYEIKWDG TRCLIFIENG KVRLQNRRLN DITYRYPEFW 

        70         80         90        100        110        120 
DLPKLVPGDG IIFDGEIVVL KDGRPEFRLL QEREHVKSPL KIKMLSERLP ATYMAFDLLY 

       130        140        150        160        170        180 
FEGKPILDKP LRERKALLKE LLPESPFVAE SQYILEKGVA FFEQVVAQGF EGVMAKDLES 

       190        200        210        220        230        240 
PYLPGKRVDF WLKFKPRGKR TCVIVGYLLR PDGTLKSLLI AEPTEKGLVY RGKVASGLNT 

       250        260        270        280        290        300 
HLSAELLIRL KGLEDKKPEN LKGRGFPKGA RWVKPEIYCE VSFQEITNHG QFRAPVLEKV 


FL 

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References

[1]"The complete genome of Thermodesulfatator indicus DSM 15286."
Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S., Peters L., Kyrpides N., Mavromatis K., Pagani I., Ivanova N., Saunders L., Detter J.C., Tapia R., Han C., Land M., Hauser L., Markowitz V. expand/collapse author list , Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., Schroeder M., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 15286 / JCM 11887 / CIR29812.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002683 Genomic DNA. Translation: AEH45292.1.
RefSeqYP_004626256.1. NC_015681.1.

3D structure databases

ProteinModelPortalF8AA06.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEH45292; AEH45292; Thein_1426.
GeneID10841686.
KEGGtid:Thein_1426.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMAVEVKYGQ.

Enzyme and pathway databases

BioCycTIND667014:GI6G-1462-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF8AA06_THEID
AccessionPrimary (citable) accession number: F8AA06
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: May 14, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)