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Protein
Submitted name:

DNA ligase D, 3'-phosphoesterase domain protein

Gene

Thein_0269

Organism
Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ligase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciTIND667014:GI6G-273-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase D, 3'-phosphoesterase domain proteinImported
Gene namesi
Ordered Locus Names:Thein_0269Imported
OrganismiThermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812)Imported
Taxonomic identifieri667014 [NCBI]
Taxonomic lineageiBacteriaThermodesulfobacteriaThermodesulfobacterialesThermodesulfobacteriaceaeThermodesulfatator
ProteomesiUP000006793: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiHASHLHW.

Family and domain databases

InterProiIPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.

Sequencei

Sequence statusi: Complete.

F8A9V5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPRFSVQEHH ASHLHWDLRL EKDGVLKSWA IPKGPPLEPG VRRLAIQTED
60 70 80 90 100
HPLDYIYFEG IIPPGYYGAG VVKLWDKGEY DIEKWEDEKI VVNFHGEKLK
110 120
GRYTLLRLRD KNWLIFKNKR QD
Length:122
Mass (Da):14,478
Last modified:September 21, 2011 - v1
Checksum:iF0D92D7F201F5F68
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002683 Genomic DNA. Translation: AEH44153.1.
RefSeqiYP_004625117.1. NC_015681.1.

Genome annotation databases

EnsemblBacteriaiAEH44153; AEH44153; Thein_0269.
GeneIDi10840497.
KEGGitid:Thein_0269.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002683 Genomic DNA. Translation: AEH44153.1.
RefSeqiYP_004625117.1. NC_015681.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEH44153; AEH44153; Thein_0269.
GeneIDi10840497.
KEGGitid:Thein_0269.

Phylogenomic databases

KOiK01971.
OMAiHASHLHW.

Enzyme and pathway databases

BioCyciTIND667014:GI6G-273-MONOMER.

Family and domain databases

InterProiIPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 15286 / JCM 11887 / CIR29812Imported.

Entry informationi

Entry nameiF8A9V5_THEID
AccessioniPrimary (citable) accession number: F8A9V5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: January 7, 2015
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.