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F8A5P6

- F8A5P6_CELGA

UniProt

F8A5P6 - F8A5P6_CELGA

Protein
Submitted name:

DNA polymerase LigD, ligase domain protein

Gene

Celgi_1690

Organism
Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 13 (01 Oct 2014)
      Sequence version 1 (21 Sep 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA polymerase LigD, ligase domain proteinImported
    Gene namesi
    Ordered Locus Names:Celgi_1690Imported
    OrganismiCellvibrio gilvus (strain ATCC 13127 / NRRL B-14078)Imported
    Taxonomic identifieri593907 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeCellulomonadaceaeCellulomonas
    ProteomesiUP000000485: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.
    OMAiHARWVEP.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F8A5P6-1 [UniParc]FASTAAdd to Basket

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    MQPMLATPAP SGVLPRGAAW AFEVKWDGVR VLAEVEGGLV RLLSRTGRPV    50
    TPAYPELAGL AHLPDVLLDG EVVALEGGVP SFAAIADRMH VRDPRRAAEL 100
    ARVRPVTFMV FDVLRVAGAD VVERPYDERR RLLEALDLPE HVLLSPVHDD 150
    GDGLWDVTRA HGLEGVVAKR RASPYRPGAR SGDWVKAAHR RTRTAYVAGW 200
    RPEQGGSGRL GALLLGAPDR DGALRFLGRA GSGVSGPLAT RLRTSALGLA 250
    RDTSPFADTV PAVDARGSHW CVPELVVDVR YLGRGREGRL RQPVVRGLRD 300
    DATVDPWEQE 310
    Length:310
    Mass (Da):33,580
    Last modified:September 21, 2011 - v1
    Checksum:i2BBAC4DAC9020656
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002665 Genomic DNA. Translation: AEI12201.1.
    RefSeqiWP_013883720.1. NC_015671.1.
    YP_004600769.1. NC_015671.1.

    Genome annotation databases

    EnsemblBacteriaiAEI12201; AEI12201; Celgi_1690.
    GeneIDi10812717.
    KEGGicga:Celgi_1690.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002665 Genomic DNA. Translation: AEI12201.1 .
    RefSeqi WP_013883720.1. NC_015671.1.
    YP_004600769.1. NC_015671.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEI12201 ; AEI12201 ; Celgi_1690 .
    GeneIDi 10812717.
    KEGGi cga:Celgi_1690.

    Phylogenomic databases

    KOi K01971.
    OMAi HARWVEP.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Cellvibrio gilvus ATCC 13127."
      Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Munk A., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Mead D., Brumm P., Woyke T.
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 13127 / NRRL B-14078Imported.

    Entry informationi

    Entry nameiF8A5P6_CELGA
    AccessioniPrimary (citable) accession number: F8A5P6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 21, 2011
    Last sequence update: September 21, 2011
    Last modified: October 1, 2014
    This is version 13 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3