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F8A5P6

- F8A5P6_CELGA

UniProt

F8A5P6 - F8A5P6_CELGA

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Protein
Submitted name:

DNA polymerase LigD, ligase domain protein

Gene

Celgi_1690

Organism
Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, ligase domain proteinImported
Gene namesi
Ordered Locus Names:Celgi_1690Imported
OrganismiCellvibrio gilvus (strain ATCC 13127 / NRRL B-14078)Imported
Taxonomic identifieri593907 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeCellulomonadaceaeCellulomonas
ProteomesiUP000000485: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiHARWVEP.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F8A5P6-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MQPMLATPAP SGVLPRGAAW AFEVKWDGVR VLAEVEGGLV RLLSRTGRPV
60 70 80 90 100
TPAYPELAGL AHLPDVLLDG EVVALEGGVP SFAAIADRMH VRDPRRAAEL
110 120 130 140 150
ARVRPVTFMV FDVLRVAGAD VVERPYDERR RLLEALDLPE HVLLSPVHDD
160 170 180 190 200
GDGLWDVTRA HGLEGVVAKR RASPYRPGAR SGDWVKAAHR RTRTAYVAGW
210 220 230 240 250
RPEQGGSGRL GALLLGAPDR DGALRFLGRA GSGVSGPLAT RLRTSALGLA
260 270 280 290 300
RDTSPFADTV PAVDARGSHW CVPELVVDVR YLGRGREGRL RQPVVRGLRD
310
DATVDPWEQE
Length:310
Mass (Da):33,580
Last modified:September 21, 2011 - v1
Checksum:i2BBAC4DAC9020656
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002665 Genomic DNA. Translation: AEI12201.1.
RefSeqiYP_004600769.1. NC_015671.1.

Genome annotation databases

EnsemblBacteriaiAEI12201; AEI12201; Celgi_1690.
GeneIDi10812717.
KEGGicga:Celgi_1690.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002665 Genomic DNA. Translation: AEI12201.1 .
RefSeqi YP_004600769.1. NC_015671.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEI12201 ; AEI12201 ; Celgi_1690 .
GeneIDi 10812717.
KEGGi cga:Celgi_1690.

Phylogenomic databases

KOi K01971.
OMAi HARWVEP.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Cellvibrio gilvus ATCC 13127."
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Munk A., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Mead D., Brumm P., Woyke T.
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 13127 / NRRL B-14078Imported.

Entry informationi

Entry nameiF8A5P6_CELGA
AccessioniPrimary (citable) accession number: F8A5P6
Entry historyi
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: October 29, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3