F8A5P6 (F8A5P6_CELGA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA polymerase LigD, ligase domain protein EMBL AEI12201.1

Gene names

Ordered Locus Names:

Celgi_1690

Organism

Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) [Complete proteome] [HAMAP] EMBL AEI12201.1

Taxonomic identifier

593907 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Cellulomonadaceae › Cellulomonas › [Cellvibrio] gilvus

Protein attributes

Sequence length	310 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AEI12201.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F8A5P6 [UniParc]. Last modified September 21, 2011. Version 1. Checksum: 2BBAC4DAC9020656	FASTA	310	33,580
	10 20 30 40 50 60 MQPMLATPAP SGVLPRGAAW AFEVKWDGVR VLAEVEGGLV RLLSRTGRPV TPAYPELAGL 70 80 90 100 110 120 AHLPDVLLDG EVVALEGGVP SFAAIADRMH VRDPRRAAEL ARVRPVTFMV FDVLRVAGAD 130 140 150 160 170 180 VVERPYDERR RLLEALDLPE HVLLSPVHDD GDGLWDVTRA HGLEGVVAKR RASPYRPGAR 190 200 210 220 230 240 SGDWVKAAHR RTRTAYVAGW RPEQGGSGRL GALLLGAPDR DGALRFLGRA GSGVSGPLAT 250 260 270 280 290 300 RLRTSALGLA RDTSPFADTV PAVDARGSHW CVPELVVDVR YLGRGREGRL RQPVVRGLRD 310 DATVDPWEQE

References

[1]

"Complete sequence of Cellvibrio gilvus ATCC 13127." Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Munk A., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Mead D., Brumm P., Woyke T. Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 13127 / NRRL B-14078.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002665 Genomic DNA. Translation: AEI12201.1.
RefSeq	YP_004600769.1. NC_015671.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEI12201; AEI12201; Celgi_1690.
GeneID	10812717.
KEGG	cga:Celgi_1690.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR014146. DNA_pol_LigD_ligase_dom. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F8A5P6_CELGA

Accession

Primary (citable) accession number: F8A5P6

Entry history

Integrated into UniProtKB/TrEMBL:	September 21, 2011
Last sequence update:	September 21, 2011
Last modified:	April 3, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)