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F7Z1B7 (F7Z1B7_BACC6) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118
Ordered Locus Names:BCO26_0117 EMBL AEH52176.1
OrganismBacillus coagulans (strain 2-6) [Complete proteome] [HAMAP] EMBL AEH52176.1
Taxonomic identifier941639 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length395 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. HAMAP-Rule MF_00118 RuleBase RU000325

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. HAMAP-Rule MF_00118 RuleBase RU000325

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
F7Z1B7 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: FCEF2718A8B47647

FASTA39543,337
        10         20         30         40         50         60 
MAKQKFDRSK EHCNIGTIGH VDHGKTTLTA AITAVLAKQG KAEARAYDQI DGAPEERERG 

        70         80         90        100        110        120 
ITINTAHVEY ETEKRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI 

       130        140        150        160        170        180 
LLSRQVGVPY IVVFLNKCDM VDDEELLELV EMEVRDLLSE YDFPGDEVPV IKGSALKALE 

       190        200        210        220        230        240 
GDPEYEAKIL ELMDAVDEYI PTPQRDTDKP FMMPVEDVFS ITGRGTVATG RVERGQLKVG 

       250        260        270        280        290        300 
DVVEIVGLSD KPKQTTVTGV EMFRKILDYA EAGDNIGALL RGIAREEVQR GQVLAKPGSI 

       310        320        330        340        350        360 
TPHTKFKAQV YVLTKEEGGR HTPFFSNYRP QFYFRTTDVT GIITLPEGVE MVMPGDNVEM 

       370        380        390 
SVELIAPIAI EEGTKFSIRE GGRTVGAGSV SSIEA 

« Hide

References

[1]"Genome sequence of the thermophilic strain Bacillus coagulans 2-6, an efficient producer of high-optical-purity L-lactic acid."
Su F., Yu B., Sun J., Ou H.Y., Zhao B., Wang L., Qin J., Tang H., Tao F., Jarek M., Scharfe M., Ma C., Ma Y., Xu P.
J. Bacteriol. 193:4563-4564(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 2-6 EMBL AEH52176.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002472 Genomic DNA. Translation: AEH52176.1.
RefSeqYP_004567562.1. NC_015634.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEF7Z1B7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEH52176; AEH52176; BCO26_0117.
GeneID10763794.
KEGGbck:BCO26_0117.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.

Enzyme and pathway databases

BioCycBCOA941639:GHC1-124-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF7Z1B7_BACC6
AccessionPrimary (citable) accession number: F7Z1B7
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: April 16, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)