Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

F7YT96 (F7YT96_VIBA7) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length859 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 18 family. RuleBase RU004453

Sequences

Sequence LengthMass (Da)Tools
F7YT96 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: A6BD7AA07FFAA077

FASTA85991,290
        10         20         30         40         50         60 
MKHSEMRDIG MNRITLCAAS IAMALSGTAM AAPATPSVDV YGSNNLQFSK VELAMESTAG 

        70         80         90        100        110        120 
YNQMVKYYDQ APIAVKFNQW SGTTGNTYKI YFDGAQVATG PITGSQTTAN FSYAQGGVYQ 

       130        140        150        160        170        180 
MAIEACDATG CSKSAPVEIT IADTDGSHLK PLVMNIDPNN KTYTTDKDTV VGTYFVEWGI 

       190        200        210        220        230        240 
YDRKYTVDNI PADNLTHILY GFIPICGPNE SLKSVGGNSY NALMTACNGV NDYEVVIHDP 

       250        260        270        280        290        300 
WAAYQKSFPQ AGHQYSSPIK GNYAMLMALK QRNPDLKILP SIGGWTLSDP FFDFTNKANR 

       310        320        330        340        350        360 
DTFVASVKKF LTTWKFYDGV DIDWEYPGGG GQAADRGDPV NDGPAYIALM RELRAMLDEL 

       370        380        390        400        410        420 
QSETGRTYEL TSAIGVGHDK IEDVNYGEAI QYMDYIFAMT YDFYGGWNNV LGHQTALYCG 

       430        440        450        460        470        480 
SFMRPGQCDG KGVDENGEPY KGPAYTADNG IQLLLAQGVP ANKLVLGAAM YGRGWEGVMP 

       490        500        510        520        530        540 
ASLSDPTDPM TGVGNGKLKG TSAQGVWEAG VIDYKGIKSF MLGANNTGIN GFEYGYDAQA 

       550        560        570        580        590        600 
EAPWVWNRTT GQLVTFDDNR SIKAKGAYAR NLGLAGLFSW EIDADNGDIL NAMHESLAGG 

       610        620        630        640        650        660 
GTTPPANRVP TANAGVDQSV VGPVSVVLDG GASKDSDGTI VSYVWQQTAG TAVSLVNANS 

       670        680        690        700        710        720 
ARASFDAAEV VQVQTLTFKL TVTDNKGATA SDVVTVTVKP KATEPVNTPP VAVITAPSNA 

       730        740        750        760        770        780 
SAGEVVVVDA SASSDVDQDT LTFAWDVPAG LNATIQGASV SFVAPEYTQD TTLSFTVTVS 

       790        800        810        820        830        840 
DGKAAASASA SVIVAKKDSG GGDTCSNLWD KSAVYTGGQQ VSWAGKVWEA KWWTTGENPS 

       850 
TTGVWGVWKE IGPASCPTS 

« Hide

References

[1]"Complete genome sequence of the marine fish pathogen Vibrio anguillarum harboring the pJM1 virulence plasmid and genomic comparison with other virulent strains of V. anguillarum and V. ordalii."
Naka H., Dias G.M., Thompson C.C., Dubay C., Thompson F.L., Crosa J.H.
Infect. Immun. 79:2889-2900(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 68554 / 775.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002285 Genomic DNA. Translation: AEH34990.1.
RefSeqYP_004577947.1. NC_015637.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEH34990; AEH34990; VAA_02862.
GeneID10777282.
KEGGvan:VAA_02862.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01183.

Enzyme and pathway databases

BioCycLANG882102:GIWG-3503-MONOMER.

Family and domain databases

Gene3D2.10.10.20. 1 hit.
2.60.40.10. 1 hit.
3.20.20.80. 2 hits.
InterProIPR003610. CBM_fam5/12.
IPR011583. Chitinase_II.
IPR013540. ChitinaseA_N.
IPR001223. Glyco_hydro18cat.
IPR001579. Glyco_hydro_18_chit_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR022409. PKD/Chitinase_dom.
IPR002859. PKD/REJ-like.
IPR000601. PKD_dom.
[Graphical view]
PfamPF02839. CBM_5_12. 1 hit.
PF08329. ChitinaseA_N. 1 hit.
PF00704. Glyco_hydro_18. 1 hit.
PF02010. REJ. 1 hit.
[Graphical view]
SMARTSM00495. ChtBD3. 1 hit.
SM00636. Glyco_18. 1 hit.
SM00089. PKD. 3 hits.
[Graphical view]
SUPFAMSSF49299. SSF49299. 2 hits.
SSF51055. SSF51055. 1 hit.
SSF51445. SSF51445. 2 hits.
SSF81296. SSF81296. 1 hit.
PROSITEPS01095. CHITINASE_18. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF7YT96_VIBA7
AccessionPrimary (citable) accession number: F7YT96
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: October 16, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)