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F7YSD1 (F7YSD1_VIBA7) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length455 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Biological processCarbohydrate metabolism RuleBase RU361134
   Molecular functionGlycosidase RuleBase RU361134
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F7YSD1 [UniParc].

Last modified September 21, 2011. Version 1.
Checksum: D0C26150A7CC32BA

FASTA45551,981
        10         20         30         40         50         60 
MTNVQPTDVI LHAFDWPYRL VAERAEQIFQ LGYKTVLISP PMKSFKTAQG TKWWQRYQPQ 

        70         80         90        100        110        120 
DYRIIDNQLG NTHDFKQMVE TLTALGLRIY ADVVFNHMAN ESKLRLDLQY PSAQDLASYQ 

       130        140        150        160        170        180 
NKSDEYQALR LFGDLTQPLF DKDDFVEAFG IKDWKDRWQV QNGRITGGAH DPGLPTLRDN 

       190        200        210        220        230        240 
EHVVVQQQAY LRALKALGVK GFRIDAAKHM SIEHLKKVWA DDITQGMHIF GEIITDGGAT 

       250        260        270        280        290        300 
KEEYQLFLEP YLQETKLGAY DFPLFQTVYD ALQTKGSLKW LIDPYCFGQA LSNNRAITFT 

       310        320        330        340        350        360 
ITHDIPNNAV FADLVMDEAL ENIAYSYILG RDGGVPLIYT DLNTSGILNH AGLPRWQEAW 

       370        380        390        400        410        420 
CSPQMAACIV FHNKMHALPM KTLEASDDLL VFSRGKEGIV VLNKSQRSQR VEIDWTNPML 

       430        440        450 
ELFTKQQYQP NNQKIVMDIA ARSSAMLCRL SNDGE 

« Hide

References

[1]"Complete genome sequence of the marine fish pathogen Vibrio anguillarum harboring the pJM1 virulence plasmid and genomic comparison with other virulent strains of V. anguillarum and V. ordalii."
Naka H., Dias G.M., Thompson C.C., Dubay C., Thompson F.L., Crosa J.H.
Infect. Immun. 79:2889-2900(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 68554 / 775.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002285 Genomic DNA. Translation: AEH34651.1.
RefSeqYP_004577608.1. NC_015637.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEH34651; AEH34651; VAA_00917.
GeneID10776943.
KEGGvan:VAA_00917.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.
OMAWQRYQPQ.

Enzyme and pathway databases

BioCycLANG882102:GIWG-3164-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF7YSD1_VIBA7
AccessionPrimary (citable) accession number: F7YSD1
Entry history
Integrated into UniProtKB/TrEMBL: September 21, 2011
Last sequence update: September 21, 2011
Last modified: July 9, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)